PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV90958

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 511aa MW: 56450.1 Da PI: 4.6834

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV90958	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.6	2.1e-16	33	80	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l ++vk++G g+W+++ + g+ R++k+c++rw ++l OIV90958 33 KGPWTSAEDAILSEYVKKHGEGNWNAVQKNSGLSRCGKSCRLRWANHL 80 79******************************************9986 PP
2	Myb_DNA-binding	50.2	5.9e-16	86	129	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE e+++++++++G++ W++ a++++ gRt++++k++w++ OIV90958 86 KGAFTPEEVERIIELHARMGNK-WARMAAELP-GRTDNEIKNYWNT 129 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MTSGSDSRKT SKGRRSSLPV EEAGEGSEGP LKKGPWTSAE DAILSEYVKK HGEGNWNAVQ 60 KNSGLSRCGK SCRLRWANHL RPDLRKGAFT PEEVERIIEL HARMGNKWAR MAAELPGRTD 120 NEIKNYWNTR VKRMERSGLP IYPADICQRV LNNNQESLDD GTLPNGSGQH DDVSQTDDFD 180 IPDLQFKNYK IPPALSYGPS SFDIPESDMF RKTSDSSHSY NALSATHPTK RLRVSDVLYN 240 NSLDSHISST VPLFDQYGNY TCEKISDHPR FPSPYDLIFD AGQFHGFNFA GSHAALNGNT 300 SSSVPINGAM KLELPSLQYS ENQQGSWGMP ASPLPSLESI DTLIQSPPTD LARSDPVSPQ 360 NSGLLEAIIL EAKNLNWSDN NSSKQTPESH VLNEAVKSST LNPCRTECDE QGDLNSLLGQ 420 SAASVLSDYT HISFCSVDWS QSIETTQDHD IQHESVAQFP AYCSSTETWS KIDLTGPDAI 480 FEYDLFDNSI ESSIDQSALK DALDAFLAEN L

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MTSGSDSRKT SKGRRSSLPV EEAGEGSEGP LKKGPWTSAE DAILSEYVKK HGEGNWNAVQ  60
KNSGLSRCGK SCRLRWANHL RPDLRKGAFT PEEVERIIEL HARMGNKWAR MAAELPGRTD  120
NEIKNYWNTR VKRMERSGLP IYPADICQRV LNNNQESLDD GTLPNGSGQH DDVSQTDDFD  180
IPDLQFKNYK IPPALSYGPS SFDIPESDMF RKTSDSSHSY NALSATHPTK RLRVSDVLYN  240
NSLDSHISST VPLFDQYGNY TCEKISDHPR FPSPYDLIFD AGQFHGFNFA GSHAALNGNT  300
SSSVPINGAM KLELPSLQYS ENQQGSWGMP ASPLPSLESI DTLIQSPPTD LARSDPVSPQ  360
NSGLLEAIIL EAKNLNWSDN NSSKQTPESH VLNEAVKSST LNPCRTECDE QGDLNSLLGQ  420
SAASVLSDYT HISFCSVDWS QSIETTQDHD IQHESVAQFP AYCSSTETWS KIDLTGPDAI  480
FEYDLFDNSI ESSIDQSALK DALDAFLAEN L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	1e-83	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV90958