PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV90932

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

CO-like

Protein Properties

Length: 407aa MW: 46379.6 Da PI: 5.8516

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV90932	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.2	3.3e-08	18	59	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg.......Ht 38 +r C+ + k+++++C ++ +lC+ C + H + H+ OIV90932 18 ARACDSCITKRARWYCAADDAFLCQACDSFVH-YanplarrHE 59 578**************************999.4355555665 PP
2	CCT	68.1	2.3e-23	358	401	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+a OIV90932 358 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 401 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MSSSTTKNVP NPVSGKTARA CDSCITKRAR WYCAADDAFL CQACDSFVHY ANPLARRHER 60 LRLKTASFKF SNELNNYASP SWHHKKARTP RQGKQSSKQS SGNNNNNPFH LVPEVGFDEV 120 NSHDDNEEQL LYRVPRFEPL CSTPSSVTSG EVAEKSKVSW DYDGNNHDGV ENMLGSVPSD 180 IELAEFAADV ESLLGKGLEN ECIGMEELGL VDTKQEASWE YSVGSGGKML KFEEEERNEV 240 GDKMMMEEIE RETYELSFHY DISNETSEEV KEKFALDVEN DGEVKENDDE KRKKILLQLD 300 YDAVISAWNS QKCPWTNGDK PNLDSDECWP HCMGSCGKEL HYPYGGFMCH SVVGAGDREA 360 RVSRYREKRR TRLFSKKIRY EVRKLNAEKR PRMKGRFVKR ASFEAPI

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MSSSTTKNVP NPVSGKTARA CDSCITKRAR WYCAADDAFL CQACDSFVHY ANPLARRHER  60
LRLKTASFKF SNELNNYASP SWHHKKARTP RQGKQSSKQS SGNNNNNPFH LVPEVGFDEV  120
NSHDDNEEQL LYRVPRFEPL CSTPSSVTSG EVAEKSKVSW DYDGNNHDGV ENMLGSVPSD  180
IELAEFAADV ESLLGKGLEN ECIGMEELGL VDTKQEASWE YSVGSGGKML KFEEEERNEV  240
GDKMMMEEIE RETYELSFHY DISNETSEEV KEKFALDVEN DGEVKENDDE KRKKILLQLD  300
YDAVISAWNS QKCPWTNGDK PNLDSDECWP HCMGSCGKEL HYPYGGFMCH SVVGAGDREA  360
RVSRYREKRR TRLFSKKIRY EVRKLNAEKR PRMKGRFVKR ASFEAPI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	369	385	RRTRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	1e-100	CO-like family protein

Link Out ? help Back to Top
Ensembl	OIV90932