PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV90931

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 204aa MW: 22689.9 Da PI: 7.7735

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV90931	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	83.5	3.1e-26	4	107	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 +C++C++lr++C+++Cvl+p + p+ q++++ +++k++G++ ++l++a+pe+ r+d+++sl+ eA+ r+ +P yG++g+++++++ +++++e++l OIV90931 4 SCNGCRTLRKGCSDNCVLRPSLewinsPDCQSNATMFLAKFYGRTAFINLISAAPESLRTDVFKSLLHEACGRLVNPTYGSMGLLWSGEWARCEAAVEAVL 104 6***********************9999****************************************************************99988 PP DUF260 97 lke 99 ++ OIV90931 105 NGS 107 765 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MKVSCNGCRT LRKGCSDNCV LRPSLEWINS PDCQSNATMF LAKFYGRTAF INLISAAPES 60 LRTDVFKSLL HEACGRLVNP TYGSMGLLWS GEWARCEAAV EAVLNGSRIH GVAAFDWLAT 120 GAHVGRVENG IQAYDIRHVP RVRDIDEVGD RRRAKRPRKT MKPTPQMGLV ELHENESMET 180 VEQPLNRVAA ETELNLELTL AFSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	157	DRRRAKRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02550.1	8e-55	LBD family protein

Link Out ? help Back to Top
Ensembl	OIV90931