PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV90566 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | HB-other | ||||||||
Protein Properties | Length: 155aa MW: 18363.9 Da PI: 10.0015 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.2 | 1.3e-18 | 23 | 75 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++t++q+++L++ F++ ++p+++ r +L+++lg+t +qVk+WFqN+R ++k OIV90566 23 CHRHTPSQIQRLQSIFKEYPHPDEKLRMRLSRELGITPKQVKFWFQNHRNQMK 75 5689*********************************************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MEYTQGNRDH QHDGGSSSKK RNCHRHTPSQ IQRLQSIFKE YPHPDEKLRM RLSRELGITP 60 KQVKFWFQNH RNQMKVQRER LDIFKLRDNN DKIRSENIAL KEALKNCICP NCGPVTVDGD 120 SFMDVQRMRL ENLQLKEELD RVSNIAAMYT GKPWV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73360.1 | 3e-52 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV90566 |