PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV90240 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MYB | ||||||||
Protein Properties | Length: 238aa MW: 27530.4 Da PI: 7.3132 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.1 | 1.3e-15 | 8 | 55 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W + Ed+ll +v+q+G g W++++++ g++R++k+c++rw++yl OIV90240 8 KGAWNKLEDDLLRVCVQQYGEGKWHLVPKRAGLNRCRKSCRLRWLNYL 55 799*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 43.4 | 7.9e-14 | 61 | 105 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg + + E +l ++++k+lG++ W++Ia +++ gRt++++k++w++y OIV90240 61 RGEFNEGEIDLMLRLHKLLGNR-WSLIAGRLP-GRTPNDVKNYWNSY 105 7889999***************.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MGSLGVRKGA WNKLEDDLLR VCVQQYGEGK WHLVPKRAGL NRCRKSCRLR WLNYLDPNIK 60 RGEFNEGEID LMLRLHKLLG NRWSLIAGRL PGRTPNDVKN YWNSYIRKKK SSHKECVNTM 120 PMETIMEPHV VIKPQPRTIS KTSPWLRGKS IREDQSGNKK CTTSEACVDV SLEFNNNCWS 180 TLVEDKVGID EDNTCLLGEK DNTLLQDLNW DDEIFSLTTT EIEDFLIEGQ TWSDVLDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 8e-56 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV90240 |