PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV90081 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 236aa MW: 25563.6 Da PI: 7.2026 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 127.5 | 6.2e-40 | 37 | 138 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +C aCk+lrrkC+++C++apyf ++q +++fa+vhk+FGasnv+kll+++pe++r++a++++ yeA+ar+ dPvyG+v+ i++lqqq+++l+ae+a+++++ OIV90081 37 PCGACKFLRRKCVAGCIFAPYFGSDQgAARFAAVHKVFGASNVSKLLSNIPESHRQEAVATVSYEAQARLADPVYGCVSSIFALQQQVASLQAEVAMTQTQ 137 7***********************9989*********************************************************************9987 PP DUF260 101 l 101 l OIV90081 138 L 138 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MGDQPQGGYG TSGTRRKGAA LRRAVAAEGQ ETVVVSPCGA CKFLRRKCVA GCIFAPYFGS 60 DQGAARFAAV HKVFGASNVS KLLSNIPESH RQEAVATVSY EAQARLADPV YGCVSSIFAL 120 QQQVASLQAE VAMTQTQLTN SRCAYVTALQ TQQQQLQQPN MNLAMQPAYS NNSSASTNFM 180 DMSNFNHGFD LAMGTAPSSH SLDPLHLSQM SHYEEEDEQE SKIPPIFNHD IGRHSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03760.1 | 2e-66 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV90081 |