PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV89918
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 156aa    MW: 18708.8 Da    PI: 9.9787
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV89918genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF40.14.7e-131147339
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEE CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevavii 39
              i++   r+ +f kR++ i+KK +EL +LC+++++ ii
  OIV89918 11 INDINARKASFNKRKKSIFKKVSELTILCGIQACAII 47
              56667799**************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MPREKVKMAY INDINARKAS FNKRKKSIFK KVSELTILCG IQACAIIQNP FDFQIEVWPN  60
PERVDQVIER YQNTSLINES RNMNQESFFI QRISKAQQKL HNLRKDNYEK KITLAMFEYI  120
QTRKLPENLT IEDLKVMDDI REKYMKEIEN KKAILY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05860.21e-29M-type_MADS family protein