PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV89917 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 156aa MW: 18436.4 Da PI: 9.7165 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 43.4 | 4.3e-14 | 11 | 49 | 3 | 41 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifs 41 i++ r+ +f kR+ gi+KK +EL vLC+++++ ii OIV89917 11 INDINARKASFKKRKRGIFKKVNELTVLCGIQACAIIQN 49 56667799**************************99965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MPRDIVKVAY INDINARKAS FKKRKRGIFK KVNELTVLCG IQACAIIQNP FDSQLEVWPN 60 PESANQMIER FQNISFIDES KNMNQESFFI QRISKAQVKL DFQRQENHEK EMNLAMFEFM 120 QTRKLPESLT ITYLKAMNDL IEKHMKEIEY KKATLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G05860.2 | 7e-29 | M-type_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV89917 |