PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV89841
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family C3H
Protein Properties Length: 394aa    MW: 44475.7 Da    PI: 7.9447
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV89841genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH28.23.2e-09127147526
               --SGGGGTS--TTTTT-SS-SS CS
   zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                C+ ++r G C++Gd+C FaHg
  OIV89841 127 VCPEYRR-GSCSRGDNCEFAHG 147
               7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
MSSVCTEQHK FHPSYQQQQL SPKKILRDID IPPRKLLTRR ATATTYDGGA DMFSDDFVQK  60
FLPCNKLDDE DEESDDPYSS DYFRMYEFKV RRCTRSRSHD WTDCPFAHPG EKARRRDPRR  120
YHYSGTVCPE YRRGSCSRGD NCEFAHGVFE CWLHPARYRT EACKDGKKCK RKVCFFAHTP  180
RQLRILPVSS QHSTSSNDNI SLCKKNINNK LFLNSSSGSN NNNCCMFCHH CVGAANSASP  240
TSTLFNMSHF SPPLSPLSTT NSPPFSPVKR AISGVNTNSY KDVVCELMNS MEGLNFGDGS  300
PISAAKARNF AWLDMSLNND DQQFLVSPSA SPFGWEDQFV LSPSTQNPTR SNVGKCSNFS  360
SKFFSNDNKV VDADINNGLS CPAPDLEWVN ELLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.15e-67C3H family protein