PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV89609

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 348aa MW: 38078.8 Da PI: 6.1866

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV89609	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3e-17	36	81	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v ++G ++W++Iar + gR++k+c++rw + OIV89609 36 KGPWSPEEDAILSRLVSKFGARNWSLIARGIS-GRSGKSCRLRWCNQ 81 79****************************.*********985 PP
2	Myb_DNA-binding	58.1	2.1e-18	88	132	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd+++v a++ +G++ W++Iar ++ gRt++ +k++w++ OIV89609 88 RKPFTNEEDQIIVAAHAVHGNK-WAAIARLLP-GRTDNAIKNHWNST 132 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MESEEPATPV DLDGGDTASG DEGMVALGAG SRDRVKGPWS PEEDAILSRL VSKFGARNWS 60 LIARGISGRS GKSCRLRWCN QLDPVVKRKP FTNEEDQIIV AAHAVHGNKW AAIARLLPGR 120 TDNAIKNHWN STLRRRGVEY DKIKLECSNM VEDVKASSED TLSCDVNSLK SSEGRDISSM 180 EIMDDKYEDR TRSEGLLCHD VKDPPTLIRP IARVSAFSVY HSFDGLQPST SVQRPIPMHG 240 PILQSSKPEN EICKMIEGIY GDRSVPHQCG HGCCAAPNGN NSKSSLLGPE FIEFSEPPSY 300 PSFELAAIAT DISNLAWLKG GLENSNVKMM GDTSSRRMCN GSEVHIGH

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MESEEPATPV DLDGGDTASG DEGMVALGAG SRDRVKGPWS PEEDAILSRL VSKFGARNWS  60
LIARGISGRS GKSCRLRWCN QLDPVVKRKP FTNEEDQIIV AAHAVHGNKW AAIARLLPGR  120
TDNAIKNHWN STLRRRGVEY DKIKLECSNM VEDVKASSED TLSCDVNSLK SSEGRDISSM  180
EIMDDKYEDR TRSEGLLCHD VKDPPTLIRP IARVSAFSVY HSFDGLQPST SVQRPIPMHG  240
PILQSSKPEN EICKMIEGIY GDRSVPHQCG HGCCAAPNGN NSKSSLLGPE FIEFSEPPSY  300
PSFELAAIAT DISNLAWLKG GLENSNVKMM GDTSSRRMCN GSEVHIGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	1e-111	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV89609