PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV89342

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 525aa MW: 58338.3 Da PI: 6.513

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV89342	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.3	6.8e-17	172	221	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OIV89342 172 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 221 78*****************......55**********************997 PP
2	AP2	42.8	1.3e-13	264	314	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g OIV89342 264 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKCNG 314 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
MWDLNDSPDQ RIKLGEEESE EGCYSIKTSM DFDDDNNNNN NKGKGVGSVS NSSSSEVVIE 60 NGSEEEQEDE KMIKKSSKIF GFSVTHEGDD SMDNENNNMP QPVITTRQFF PVDETDVAAA 120 SDGGGGSGIS SFPRAHWVGV KFCQSEPVGA GKSVEVSQPM KKSRRGPRSR SSQYRGVTFY 180 RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GVEADINFNI EDYEEDLKQM 240 SNLTKEEFVH VLRRQSTGFP RGSSKYRGVT LHKCGRWEAR MGQFLGKKYV YLGLFDTEVE 300 AARAYDKAAI KCNGKEAVTN FDPSIYDNEL NSESAGTTIT ADHNLDLSLG NSSSKLGNHI 360 PNSSTHDQHI SSESNWRNAG SIIKPKLVNI LPKPYSNISN METHSGESEA LRMLSQTRLI 420 SSLPSNEIQR YGPYRPHGES QMLNNFAHLH PPNFHFLSSC NGRGHIGSDL SLSMSDQQQQ 480 QWQPGPPHYL ATAAASSGFP PQIIRPSSQG WLQNNGFHNL MRPSS

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

MWDLNDSPDQ RIKLGEEESE EGCYSIKTSM DFDDDNNNNN NKGKGVGSVS NSSSSEVVIE  60
NGSEEEQEDE KMIKKSSKIF GFSVTHEGDD SMDNENNNMP QPVITTRQFF PVDETDVAAA  120
SDGGGGSGIS SFPRAHWVGV KFCQSEPVGA GKSVEVSQPM KKSRRGPRSR SSQYRGVTFY  180
RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GVEADINFNI EDYEEDLKQM  240
SNLTKEEFVH VLRRQSTGFP RGSSKYRGVT LHKCGRWEAR MGQFLGKKYV YLGLFDTEVE  300
AARAYDKAAI KCNGKEAVTN FDPSIYDNEL NSESAGTTIT ADHNLDLSLG NSSSKLGNHI  360
PNSSTHDQHI SSESNWRNAG SIIKPKLVNI LPKPYSNISN METHSGESEA LRMLSQTRLI  420
SSLPSNEIQR YGPYRPHGES QMLNNFAHLH PPNFHFLSSC NGRGHIGSDL SLSMSDQQQQ  480
QWQPGPPHYL ATAAASSGFP PQIIRPSSQG WLQNNGFHNL MRPSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-123	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIV89342