PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV89200
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family C3H
Protein Properties Length: 362aa    MW: 39983.5 Da    PI: 7.3278
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV89200genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH47.52.9e-15278303126
               --S---SGGGGTS--TTTTT-SS-SS CS
   zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
               +ktelC+ +++tGtC+yGd C+FaHg
  OIV89200 278 FKTELCNKWQETGTCPYGDHCQFAHG 303
               79***********************8 PP

2zf-CCCH18.34.1e-06316340125
               --S---SGGGGTS.--TTTTT-SS-S CS
   zf-CCCH   1 yktelCrffartG.tCkyGdrCkFaH 25 
               ykte Cr  ++ G  C+yG rC+F H
  OIV89200 316 YKTEVCRMVLA-GvVCPYGHRCHFRH 340
               9**********.66**********88 PP

Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MHNNNACSPS SNRGYGANTA DADQMQSNSA AAFASFYSAL LNENIPPSIS ASCSNLGGGG  60
YSYSSDSGTQ SHGYDSCFIQ KHQDMVNRHS MCLTRLVETS KEVEALRQEN AQLHAVNNEL  120
QKNLNLVIQA SLENQFGGET QTTAFDVVHG FRGFHVGDGK ENCADWNMNI NNNNNNNNCK  180
NEKVEVSEES PTSVIENNGV EVERFALPKS ISVRSNGYLK TQSAAVVPTN TVATRIKGAT  240
RPRASSTPPP DVVQKVYVRG GQKEEEPLEM VVYNQGMFKT ELCNKWQETG TCPYGDHCQF  300
AHGIGELRPV IRHPRYKTEV CRMVLAGVVC PYGHRCHFRH ALTEQEKALS HPKPRAMKQL  360
DR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68200.13e-82C3H family protein