PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV89004

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 422aa MW: 47132.8 Da PI: 9.6792

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV89004	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51.8	2e-16	148	196	1	54
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 s+++GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k+ OIV89004 148 SQFRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDKAAIKFS 196 789****************......55********************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MAMFDLNYDI IHIDSNSTCS KELVQLQSFP SKISHSGASK SSIVINPMEE DSSNNSSPFI 60 FDIMKKRTDG NERNKGVENI AQEQERVTMT LFPVTADRGG RVSDMNKRKT EWLNLSFAEH 120 NGQNELKTLH QKQPQIKKGR RGPRSRSSQF RGVTFYRRTG RWESHIWDCG KQVYLGGFDT 180 AHAAARAYDK AAIKFSGVDA DINFDLSDYD EDMKQMNNLS KEEFVLLLRR QMYGISRATS 240 AYRRLLALHK FGQGDAKMGT FVGTRFCQKQ PIKCDDRLVS TNLKPIYNGE IIANYSKGGT 300 CHNLDLSLGI SPSYSKQQRV NDSAGQLSFG YIAPEITQQR ETKEKNGLGN VPLQRFSNLG 360 TRQLCSNINI ASGRLLSNAA SSGYFLNNSN VSSAIHPITT HDSSAYNFCT GSATKSSFNS 420 PS

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MAMFDLNYDI IHIDSNSTCS KELVQLQSFP SKISHSGASK SSIVINPMEE DSSNNSSPFI  60
FDIMKKRTDG NERNKGVENI AQEQERVTMT LFPVTADRGG RVSDMNKRKT EWLNLSFAEH  120
NGQNELKTLH QKQPQIKKGR RGPRSRSSQF RGVTFYRRTG RWESHIWDCG KQVYLGGFDT  180
AHAAARAYDK AAIKFSGVDA DINFDLSDYD EDMKQMNNLS KEEFVLLLRR QMYGISRATS  240
AYRRLLALHK FGQGDAKMGT FVGTRFCQKQ PIKCDDRLVS TNLKPIYNGE IIANYSKGGT  300
CHNLDLSLGI SPSYSKQQRV NDSAGQLSFG YIAPEITQQR ETKEKNGLGN VPLQRFSNLG  360
TRQLCSNINI ASGRLLSNAA SSGYFLNNSN VSSAIHPITT HDSSAYNFCT GSATKSSFNS  420
PS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.2	3e-53	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIV89004