PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp1324s0027.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 383aa MW: 41955.8 Da PI: 6.5641

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp1324s0027.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.9	1.2e-18	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd++++ G g+W++ ++ g++R++k+c++rw +yl Kaladp1324s0027.1.p 15 KGPWTPEEDKKLVDYIEKNGHGSWRALPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	54.1	3.5e-17	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++I+++++ gRt++++k++w+++l Kaladp1324s0027.1.p 68 RGKFSEEEEQAIINLHSVLGNK-WSAISSHLP-GRTDNEIKNFWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MMGRSAGSDE NGLKKGPWTP EEDKKLVDYI EKNGHGSWRA LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FSEEEEQAII NLHSVLGNKW SAISSHLPGR TDNEIKNFWN THLKKKLLQM 120 GIDPITHRPR TDHLNLLANL PQLLAAANLT HLITNSSNPW DNAMRLQQHL SSDHQQHLAK 180 VQLMNNLIQA LNSAANPPSN LDVMMASLFG NQASFQDQRV LESLIRMNGG HVEASEFGNG 240 GQISHFSASS NPMQLDDFTG LEGTEPFSNP NSAAQISSQF GGGSYCLPPF GDHGSKIPAL 300 VSAASPECGI NGATTLGALD SQFKMSITKN PSTDISNPSS TTSTTFEAWG DHHQMAEDDD 360 ANESYWKDIM DQASSSSWPI RL*

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MMGRSAGSDE NGLKKGPWTP EEDKKLVDYI EKNGHGSWRA LPKLAGLNRC GKSCRLRWTN  60
YLRPDIKRGK FSEEEEQAII NLHSVLGNKW SAISSHLPGR TDNEIKNFWN THLKKKLLQM  120
GIDPITHRPR TDHLNLLANL PQLLAAANLT HLITNSSNPW DNAMRLQQHL SSDHQQHLAK  180
VQLMNNLIQA LNSAANPPSN LDVMMASLFG NQASFQDQRV LESLIRMNGG HVEASEFGNG  240
GQISHFSASS NPMQLDDFTG LEGTEPFSNP NSAAQISSQF GGGSYCLPPF GDHGSKIPAL  300
VSAASPECGI NGATTLGALD SQFKMSITKN PSTDISNPSS TTSTTFEAWG DHHQMAEDDD  360
ANESYWKDIM DQASSSSWPI RL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	3e-94	MYB family protein