PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp1310s0012.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 25826.1 Da PI: 5.0616 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.6 | 3.7e-19 | 27 | 76 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 + GVr+++ +gr++AeIrdp++ + r++lg+f+taeeAa a+++a+++++g+ Kaladp1310s0012.1.p 27 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAEEAALAYDRAARSMRGA 76 67******.**********965...5*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MNTPPTSSSK SKKKTTSSSP SDSGHRFLGV RRRPWGRYAA EIRDPTTKER HWLGTFDTAE 60 EAALAYDRAA RSMRGARART NFVYPDTPAG SSVTSLLSPD HHHHLTYPPD PVTRPESAQF 120 GYIDWGGFEP EPFDPPQQQM VSQMQGMSVS SEFYDSGAMS SDLPPLPSSY SSSEYSDVGF 180 WSGLEQSSFD NGGNGSSYVG FDSAAEYVHS PLFGRMPSVA EAVPDGFDLG SSSYFF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13910.1 | 1e-25 | ERF family protein |