PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp1129s0041.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

GATA

Protein Properties

Length: 512aa MW: 56456.9 Da PI: 5.0076

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp1129s0041.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	41.9	1.4e-13	7	40	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C +Cg+ +TplWR+gp ++ LCnaCG ++r kg Kaladp1129s0041.1.p 7 CCHCGVASTPLWRNGPPDKPVLCNACGSRWRTKG 40 99************55555********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MGKQGPCCHC GVASTPLWRN GPPDKPVLCN ACGSRWRTKG NLTNYAPLHS RAEPDNFSDH 60 KELRIKITYG RDKEDICPKR KRTNENAMTG SISSDYNDIF WKAMDDDTSN RSSSGSAISN 120 SESCAQFGTT YFNEFTGPAQ VVMADRTKPA KKRTCIPRPR SSSIAALTKN LCTILQQQQS 180 SGFPVSSEED LLFESDKSIF SAETGHGSYL IRDTSSMTRE EDSEASSFSV NNKPYLGSET 240 SFYPKPLPVH TSSIKGVADD IMSNNPTRHH EKTEERNSEE SEISEILGSQ SSALTTINLK 300 DVFIHEEFLR HLTDEEQGQV LKCLPYVDDS RLSSCLQSLF DSFSTFQKLI TEELFGASLP 360 GITSDDCDTF NRLAFCNLLK SKSVELFNVM KKCKHSAAAT RAYPETKTLM KIPNTAPSPV 420 CKEKTEADDI DNDSACSSQK NLLALPADSN PYMLDPLSYS DENCDQDLLL DMPSSNSFPD 480 AELIFSAPSF GIPHDRLGSC SCSAYPNFIG Q*

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MGKQGPCCHC GVASTPLWRN GPPDKPVLCN ACGSRWRTKG NLTNYAPLHS RAEPDNFSDH  60
KELRIKITYG RDKEDICPKR KRTNENAMTG SISSDYNDIF WKAMDDDTSN RSSSGSAISN  120
SESCAQFGTT YFNEFTGPAQ VVMADRTKPA KKRTCIPRPR SSSIAALTKN LCTILQQQQS  180
SGFPVSSEED LLFESDKSIF SAETGHGSYL IRDTSSMTRE EDSEASSFSV NNKPYLGSET  240
SFYPKPLPVH TSSIKGVADD IMSNNPTRHH EKTEERNSEE SEISEILGSQ SSALTTINLK  300
DVFIHEEFLR HLTDEEQGQV LKCLPYVDDS RLSSCLQSLF DSFSTFQKLI TEELFGASLP  360
GITSDDCDTF NRLAFCNLLK SKSVELFNVM KKCKHSAAAT RAYPETKTLM KIPNTAPSPV  420
CKEKTEADDI DNDSACSSQK NLLALPADSN PYMLDPLSYS DENCDQDLLL DMPSSNSFPD  480
AELIFSAPSF GIPHDRLGSC SCSAYPNFIG Q*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-83	GATA family protein