PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1072s0001.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 331aa    MW: 36884.8 Da    PI: 8.0366
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1072s0001.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.35.6e-161462148
                         TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                         +g+W++eEd++l++++ ++G+g +W + + + g++R++k+c++rw++yl
  Kaladp1072s0001.1.p 14 KGPWSPEEDLKLKEYIDKHGTGgNWISLPLKAGLRRCGKSCRLRWLNYL 62
                         79*********************************************97 PP
2Myb_DNA-binding33.31.1e-1069111246
                          SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          g ++  Ed ++  +    G++ W+ Ia+ ++ gRt++++k++w++
  Kaladp1072s0001.1.p  69 GEFSDHEDRIICTLYYNIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
                          789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MGRAPCCDKA NVKKGPWSPE EDLKLKEYID KHGTGGNWIS LPLKAGLRRC GKSCRLRWLN  60
YLRPNIKHGE FSDHEDRIIC TLYYNIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLVAA  120
NYVAPLPLSS LSSSPNSELM HHPHLQYLPS PTAALCTSAC YFKDPSARLL LPAAAVGCFT  180
SSSSDNDLKY GSGDQMFHHH HADNYVAGTV NLQNYPQLNN NKDYNNSFAM LGGTTDGSCT  240
SSDGSNSNIN TKYHISHELY QIGFHDHGGV RNKLVVQDDI YIYIYIYIYI CSTHLRLALA  300
LSSFVAHILG VICHLLEQEV CLVNWTTDGS *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.12e-75MYB family protein