PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp1047s0006.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Protein Properties

Length: 694aa MW: 76080.7 Da PI: 6.509

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp1047s0006.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	62.1	8.8e-20	554	651	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 +kvl++sdv+++gr+vlpkk ae+h ++ + ++ + +ed ++++W++++++ ++ks++y+l+ ++ +Fv++ngL+egDf+v++ + Kaladp1047s0006.1.p 554 QKVLKQSDVGSLGRIVLPKKEAETHlpQLTARDGINIAMEDiGTSNVWNMRYRFwpNNKSRMYLLE-NTGDFVRSNGLQEGDFIVIY--S 640 79***********************999999****7778***99777777777777.******************..6 PP S.SEE..EEEE CS B3 87 r.sefelvvkv 96 + ++++++++ Kaladp1047s0006.1.p 641 DiKCGKYMIRG 651 77999888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
MEMKDDTGVA EYEKSTDNLL HAAPLDAAGM EDNDVMLDLS CFGGGGYDSA AAAMEEADHQ 60 DLMDSAAAIF CDDLIPPLPD FQCMSSSSSS SSSVKPVAYQ STASSSVSST SSSWAVLRSE 120 SEEHNVAAGG YTSHHDHSHG HHPQQVVREQ SNGLDEDGDI GCMDVMETLS YIDLLDESGQ 180 VWGYKDSPVF YSSPVEAFQA ENELQRPEPM AETHTEGLDK SEDLAMVFFE WLKSNKESIS 240 AEDLRSIKLK KSTIESAAKR LGNGKEGMKR LLQLILEWVQ HHQLQRKPSR EEGVAAAAAQ 300 PQFPNHPYPD TNLSNSNFQP DLSHTSPWSV GSSAGLDPMM AVGVPAPFGH LSNMADQQWP 360 PLCMNYDNST NAGQNLTPAL HPFGAAAFNQ YPCQYYPAVG NVSYLNGAVS EEVFVRTGSA 420 ATKEARKKRM ARQRRFLPHH RHHHHHSSSG NGKAHGQHHG SNGLSNQMRM LTGAGQLGRV 480 NMDESCANIS HPPSGGYWAY LHNASPPQPP HLPVVPNSGN SIQGNEESPS YQRPIALDRR 540 QGSKPEKNLR FLLQKVLKQS DVGSLGRIVL PKKEAETHLP QLTARDGINI AMEDIGTSNV 600 WNMRYRFWPN NKSRMYLLEN TGDFVRSNGL QEGDFIVIYS DIKCGKYMIR GVKVRQQGPK 660 PDIRRSGKAL KKNTWPTSNG SPFAPPSPKT PLA*

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

MEMKDDTGVA EYEKSTDNLL HAAPLDAAGM EDNDVMLDLS CFGGGGYDSA AAAMEEADHQ  60
DLMDSAAAIF CDDLIPPLPD FQCMSSSSSS SSSVKPVAYQ STASSSVSST SSSWAVLRSE  120
SEEHNVAAGG YTSHHDHSHG HHPQQVVREQ SNGLDEDGDI GCMDVMETLS YIDLLDESGQ  180
VWGYKDSPVF YSSPVEAFQA ENELQRPEPM AETHTEGLDK SEDLAMVFFE WLKSNKESIS  240
AEDLRSIKLK KSTIESAAKR LGNGKEGMKR LLQLILEWVQ HHQLQRKPSR EEGVAAAAAQ  300
PQFPNHPYPD TNLSNSNFQP DLSHTSPWSV GSSAGLDPMM AVGVPAPFGH LSNMADQQWP  360
PLCMNYDNST NAGQNLTPAL HPFGAAAFNQ YPCQYYPAVG NVSYLNGAVS EEVFVRTGSA  420
ATKEARKKRM ARQRRFLPHH RHHHHHSSSG NGKAHGQHHG SNGLSNQMRM LTGAGQLGRV  480
NMDESCANIS HPPSGGYWAY LHNASPPQPP HLPVVPNSGN SIQGNEESPS YQRPIALDRR  540
QGSKPEKNLR FLLQKVLKQS DVGSLGRIVL PKKEAETHLP QLTARDGINI AMEDIGTSNV  600
WNMRYRFWPN NKSRMYLLEN TGDFVRSNGL QEGDFIVIYS DIKCGKYMIR GVKVRQQGPK  660
PDIRRSGKAL KKNTWPTSNG SPFAPPSPKT PLA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26790.1	8e-38	B3 family protein