PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0964s0014.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 479aa MW: 52745.2 Da PI: 4.8005 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.5 | 2.7e-17 | 31 | 78 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+ Ed +l d+v+++G g+W+++ + g++R++k+c++rw ++l Kaladp0964s0014.1.p 31 KGQWTPAEDAILRDYVEKHGEGNWNAVQKFSGLTRCGKSCRLRWANHL 78 799*****************************************9986 PP | |||||||
2 | Myb_DNA-binding | 50.6 | 4.3e-16 | 84 | 127 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+eE el ++++++lG++ W++ a++++ gRt++++k++w++ Kaladp0964s0014.1.p 84 RGAFTPEEVELVIKLHAKLGNK-WAKMAAELP-GRTDNEIKNFWNT 127 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 479 aa Download sequence |
MEWNVTDEIL ESPSGEDLAS GEGKSSGILT KGQWTPAEDA ILRDYVEKHG EGNWNAVQKF 60 SGLTRCGKSC RLRWANHLKP NLKRGAFTPE EVELVIKLHA KLGNKWAKMA AELPGRTDNE 120 IKNFWNTRIK RHQRSGLPIY PPEVCLKLAE ESQQSPHSAT FSIDLPSSHH FMEPSDFMIP 180 EFKIERPLNP SLFLDIPTSK EPPLGLGLVN TPNGLCDTAS RSLFENQIIH AHHLPELYSS 240 NSPLLCIPLG SHALTNGNLP TSAPGFGSVK LELPSLQSSE SDFIFWGAPA SPRPSFASKD 300 SVAPSPQVGP DLLQPAPDTD GLLESVVCPP NRLKTSNLDD LSLDPEWWEV LCDQPVTPMG 360 PSANGNSTDE LLSADVILGK LTHENHLHEV VSNIFFLVNQ VSLCLCDFHA GNEGKISDAD 420 PKQHLTSSNL NEIRDSCEWD PWRPDTWFNA ALLSPETEHA REYQRLQETI SAICGDDA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11440.1 | 1e-69 | MYB family protein |