PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0912s0009.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WOX

Protein Properties

Length: 304aa MW: 32498.8 Da PI: 5.1142

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0912s0009.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	47.4	3.3e-15	42	102	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p +ee ++ + l + +++V++WFqNrR + ++ Kaladp0912s0009.1.p 42 RSRWTPKPEQILILESIFNSgMVNPPKEETVRIRRVLekfgPVGDANVFYWFQNRRSRSRR 102 89***************99************99999**************997 PP
2	Wus_type_Homeobox	104.7	5.9e-34	41	104	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+kee+ ri++ Le++G ++d+NVfyWFQNr++R+r++q Kaladp0912s0009.1.p 41 VRSRWTPKPEQILILESIFNSGMVNPPKEETVRIRRVLEKFGPVGDANVFYWFQNRRSRSRRRQ 104 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MNDHGNPEAD SGSSITYDAS NPSQRQTHVA QSPDRASSEQ VRSRWTPKPE QILILESIFN 60 SGMVNPPKEE TVRIRRVLEK FGPVGDANVF YWFQNRRSRS RRRQRQIQAN MEANVRNTTQ 120 YDPSSNFNSP NSSMIIPIAS GFVGISGSNA AVDSGTSIPP FLIPSSSETL SGSASSSSPS 180 ALSAAAFGAT GVQGFLSEMG FEDIEDNGTQ AIASSFLCTS DVTSDLQYQQ PGGEGAEGGG 240 FVTVFINGVP TEVPRGPLDM KAMCGHDFLL VHSSGHPVPI NEYGFSAHSL QHGESYFLVA 300 KSI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.2	2e-60	WOX family protein