PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0868s0040.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 285aa    MW: 31735.6 Da    PI: 7.6446
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0868s0040.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.11.3e-151461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+W++eEd ll +++ + G g W++++ + g++R++k+c++rw++yl
  Kaladp0868s0040.1.p 14 KGAWSEEEDALLRECIDKNGEGKWHLVPLKSGLNRCRKSCRLRWLNYL 61
                         79********************************************97 PP
2Myb_DNA-binding53.17.3e-1767112148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg+++++E +ll++++k+lG++ W++Ia +++ gRt++++k++w+++l
  Kaladp0868s0040.1.p  67 RGKFSEDEVDLLLRLHKLLGNR-WSLIAGRLP-GRTANDVKNYWNTHL 112
                          89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MLAAEHDGPR GVRKGAWSEE EDALLRECID KNGEGKWHLV PLKSGLNRCR KSCRLRWLNY  60
LKPNIRRGKF SEDEVDLLLR LHKLLGNRWS LIAGRLPGRT ANDVKNYWNT HLRKKTMLRL  120
QAAAAAADCH RATTKVIRPR PRTFSKTLLV QRMRSSQQQQ QAAPAAGLLL QHTTTSTTAV  180
SKLEGHHDNN ANPDAAGEQI QWWKSLLDDQ LSDGQEVAAA AALASESRSD HVSYEIWAAE  240
DQSGDRPEET GLMTGEVAFD IELWDFLADD EAQATSNLLQ GPSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.12e-58MYB family protein