PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0844s0013.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 269aa    MW: 30327.1 Da    PI: 8.071
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0844s0013.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.82.1e-19135189256
                          T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          rk+ +++k+q  +Lee F+++++++ +++  LAk+lgL  rqV vWFqNrRa+ k
  Kaladp0844s0013.1.p 135 RKKLRLSKDQSAILEETFKEHSTLNPKQKMALAKQLGLRPRQVEVWFQNRRARTK 189
                          788899***********************************************98 PP
2HD-ZIP_I/II129.51.3e-41135224191
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          +kk+rlsk+q+++LEe+F+e+++L+p++K++la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +
  Kaladp0844s0013.1.p 135 RKKLRLSKDQSAILEETFKEHSTLNPKQKMALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-A 223
                          69*************************************************************************************9.5 PP

          HD-ZIP_I/II  91 l 91 
                          l
  Kaladp0844s0013.1.p 224 L 224
                          5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MMVDREADLG LSLSLNFTHN NTHKQNHQLP NKNQLQIQNV HLFPTYFNSA ALQHRASWNP  60
FLSGIDQTST LTKGVIDVNR LPSCEDYTED AGASSPNSTI SSLSGKRSER DDNNADHLDR  120
AACSGSDEED GDNSRKKLRL SKDQSAILEE TFKEHSTLNP KQKMALAKQL GLRPRQVEVW  180
FQNRRARTKL KQTEVDCEFL KRCCENLTEE NRRLQKEVQE LRALKLSPQL YMQMAPPTTL  240
TMCPSCERVG APQAPRPPLL TSNPWAAL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134140SRKKLRL
2184192RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16780.11e-95HD-ZIP family protein