PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0840s0019.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family TCP
Protein Properties Length: 469aa    MW: 50854.7 Da    PI: 8.2316
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0840s0019.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP117.71.4e-36742262133
                  TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssasec.e 74 
                           g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a  +i el+++                +++s+s + +
  Kaladp0840s0019.1.p  74 SGGKDRHSKVLTSKGLRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAVEWLIKAAADSIAELPSLtgpfpetprqlcdaklGFESSSVAaT 163
                          689*************************************************************99999888888888884444433332 PP

                  TCP  75 aesssssasnsssgkaaksaakskksqksaasalnlak.....esrakarararertrekmrik 133
                           +++  +++++++ + + s+  s+ s++s+ s  +l +     ++r +ar+rarer +ek + +
  Kaladp0840s0019.1.p 164 -AAEADASHTQQKMNVSMSKSASSTSETSKGSGISLTRtdarvNQRVRARERARERAKEKESET 226
                          .222222222222222222222223333333333333330114566777777777777776554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    
MDVEEFQSQI YTSKYPRVST TNNGGGGGDE DDAHDTPTRN HHSTVVAAEP QMLADSMFRG  60
WQHSSRIFRV SRASGGKDRH SKVLTSKGLR DRRVRLSVST AIQFYDLQDR LGYDQPSKAV  120
EWLIKAAADS IAELPSLTGP FPETPRQLCD AKLGFESSSV AATAAEADAS HTQQKMNVSM  180
SKSASSTSET SKGSGISLTR TDARVNQRVR ARERARERAK EKESETEQAV VNAGQRRRQS  240
GGNPISHPTT NNNNSSSFTE LLTGAIGGNQ TGSSPNSAPM MMDYFTNVAR PTLGSHHHHQ  300
AAAACLFLGQ TQMGNSINMP QAFHLTTGEH HNHHQQQHHG LQHFSFGQEN LIPAGNEYDL  360
NFTISSSSPS SLAGFNNRGT LQSNSPPAAS PSSLLHHSNQ QLQRYAASME GSNNVVPAFF  420
MTTASASSAM ETNHQHHHFP TGLDGRLHLY YGDGGGRHCD HKDGKGKN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1208218RVRARERARER
2208220RVRARERARERAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.19e-41TCP family protein