PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0809s0083.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

ARR-B

Protein Properties

Length: 628aa MW: 68983.8 Da PI: 4.7822

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0809s0083.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	65.7	7.9e-21	257	308	1	54
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 k r++Wt eLH++F++a+e++ G++ A+P +il++m+v+ Lt+++v+SHLQk++ Kaladp0809s0083.1.p 257 KRRVNWTAELHNKFIDAIERI-GPN-AVPMEILKVMNVPWLTRANVASHLQKFK 308 689****************.776.************************97 PP
2	Myb_DNA-binding	31.7	3.4e-10	259	308	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 r +WT+e++ +++da+++ G++ + I + m+ +t+ ++ s++qk++ Kaladp0809s0083.1.p 259 RVNWTAELHNKFIDAIERIGPNaVPMEILKVMNvPWLTRANVASHLQKFK 308 789***************99************************96 PP
3	Response_reg	74.5	4.1e-25	65	173	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 vl vdD+ + +++l +l++ +y +v+e++++ eal++l++++ +D++++D +m +mdGl ll++i e +lp+++++a ++++ + + Kaladp0809s0083.1.p 65 VLAVDDSVVCLKILVALLKHCKY-NVTETTNPVEALQILRTRKheFDIVITDQRMLEMDGLVLLQKISLEM-DLPVVMLSADNNQQNIMK 152 799******************.***********666666******************8865.9************* PP HHHTTESEEEESS--HHHHHH CS Response_reg 89 alkaGakdflsKpfdpeelvk 109 a+++Ga+d++ Kp ++++ + Kaladp0809s0083.1.p 153 AIRYGARDYIIKPPGMAQIKN 173 ***********99888865 PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
MPSSQQEQTI AVAADGSSPD ADNKKLDQPG LETTCEDQDH YLSWDDLADD HAKEIPSFKI 60 DGLRVLAVDD SVVCLKILVA LLKHCKYNVT ETTNPVEALQ ILRTRKHEFD IVITDQRMLE 120 MDGLVLLQKI SLEMDLPVVM LSADNNQQNI MKAIRYGARD YIIKPPGMAQ IKNVWQHVVR 180 KQLFGSGCKD VNNANNSSVT IEETRSPVED SKRKQTEIEQ DDNCDDEMGK TDEEAASAWT 240 GCGNAADGSG AGAAKKKRRV NWTAELHNKF IDAIERIGPN AVPMEILKVM NVPWLTRANV 300 ASHLQKFKNA LRGQTQSAQP ARNVYNSRVN SAAGQSGYQS SLSSASPYSI GTMNYGSSAS 360 TYPVGTSQIL PQRLSYQQSN LNPMIQNLGY ANQSQSHTQH YNLPFNPSAY QAPTMLNDAP 420 LPPKTVRPDI QGHPPVPKFN GLRFPTSGTM NDNNMINSYS VNRPQLPAPT LAPSQPTYAY 480 TPAVAPTSVR VADSQQHDML TEGENYGVGL TSESQNMYAQ LDWTGAPDLQ DTLMPISDTN 540 NTGNFEASPF LTNPMEPTSM DGHIAVSPNL SHSNRFKVQP FHSTPQEELP IDPTSFQAIN 600 TNLSDEDDNE ELSNMVNTFN CEGPPSL*

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

MPSSQQEQTI AVAADGSSPD ADNKKLDQPG LETTCEDQDH YLSWDDLADD HAKEIPSFKI  60
DGLRVLAVDD SVVCLKILVA LLKHCKYNVT ETTNPVEALQ ILRTRKHEFD IVITDQRMLE  120
MDGLVLLQKI SLEMDLPVVM LSADNNQQNI MKAIRYGARD YIIKPPGMAQ IKNVWQHVVR  180
KQLFGSGCKD VNNANNSSVT IEETRSPVED SKRKQTEIEQ DDNCDDEMGK TDEEAASAWT  240
GCGNAADGSG AGAAKKKRRV NWTAELHNKF IDAIERIGPN AVPMEILKVM NVPWLTRANV  300
ASHLQKFKNA LRGQTQSAQP ARNVYNSRVN SAAGQSGYQS SLSSASPYSI GTMNYGSSAS  360
TYPVGTSQIL PQRLSYQQSN LNPMIQNLGY ANQSQSHTQH YNLPFNPSAY QAPTMLNDAP  420
LPPKTVRPDI QGHPPVPKFN GLRFPTSGTM NDNNMINSYS VNRPQLPAPT LAPSQPTYAY  480
TPAVAPTSVR VADSQQHDML TEGENYGVGL TSESQNMYAQ LDWTGAPDLQ DTLMPISDTN  540
NTGNFEASPF LTNPMEPTSM DGHIAVSPNL SHSNRFKVQP FHSTPQEELP IDPTSFQAIN  600
TNLSDEDDNE ELSNMVNTFN CEGPPSL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	255	259	KKKRR
2	255	260	KKKRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	5e-57	ARR-B family protein