PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0809s0081.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CO-like

Protein Properties

Length: 396aa MW: 42636.9 Da PI: 6.502

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0809s0081.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.8	4.4e-08	33	64	4	35
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35 + C+ +++ + lfC+ ++ +lC C + +H Kaladp0809s0081.1.p 33 KPCDVCKSASALLFCKPDSAFLCVACDTRIHA 64 67*****************************3 PP
2	zf-B_box	24.6	5.2e-08	74	119	2	41
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 + ++C+ +e+ +++ C+ + lC +C +H+ H++v+ Kaladp0809s0081.1.p 74 RLWMCEVCEQVPASVTCKADAAALCVSCDADIHSAnplsrkHDRVQ 119 5789*****************************6688888898876 PP
3	CCT	69.6	8e-24	325	369	1	45
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 Rea++lRY+eKrk+R+FeK+irY+sRKa+Ae+RpR+KGrFvk+ae Kaladp0809s0081.1.p 325 REARVLRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRFVKRAE 369 9*****************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MGILVEESCV KGYPVVGGGG GGGGLGVWPI AAKPCDVCKS ASALLFCKPD SAFLCVACDT 60 RIHAVNRLAS RHERLWMCEV CEQVPASVTC KADAAALCVS CDADIHSANP LSRKHDRVQL 120 VPFYESAESI IKKSSAANAA AASGNGTNNL VNFLVPGADE EEDQVDDVSW FLPPQKAAVA 180 AVAAMNPSEG KAAGGEMFFS DFDHLLDFEN PNQVYLNFKN NQHVGGSDSV VPVQIKPETV 240 SKISSFDRCY DIDFCKSKLP FYNFDQSNNH SVSSSALDIG LVPDGGSASD ISYSLGKHIK 300 SGGGEAHGVD SSSSTQATQL TGLDREARVL RYREKRKNRR FEKTIRYASR KAYAETRPRI 360 KGRFVKRAEP DLELDSLFNS GSIHFFEGYG VVPSY*

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MGILVEESCV KGYPVVGGGG GGGGLGVWPI AAKPCDVCKS ASALLFCKPD SAFLCVACDT  60
RIHAVNRLAS RHERLWMCEV CEQVPASVTC KADAAALCVS CDADIHSANP LSRKHDRVQL  120
VPFYESAESI IKKSSAANAA AASGNGTNNL VNFLVPGADE EEDQVDDVSW FLPPQKAAVA  180
AVAAMNPSEG KAAGGEMFFS DFDHLLDFEN PNQVYLNFKN NQHVGGSDSV VPVQIKPETV  240
SKISSFDRCY DIDFCKSKLP FYNFDQSNNH SVSSSALDIG LVPDGGSASD ISYSLGKHIK  300
SGGGEAHGVD SSSSTQATQL TGLDREARVL RYREKRKNRR FEKTIRYASR KAYAETRPRI  360
KGRFVKRAEP DLELDSLFNS GSIHFFEGYG VVPSY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	2e-97	CO-like family protein