PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0809s0077.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 358aa MW: 40384.9 Da PI: 6.3484 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.2 | 3.5e-17 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+d+++++G+g +W + ++++g+ R++k+c++rw++yl Kaladp0809s0077.1.p 14 RGPWSPEEDAKLKDYIEKHGTGgNWIALPHKIGLQRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 37.3 | 6.3e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ Kaladp0809s0077.1.p 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 358 aa Download sequence |
MGRAPCCDKD SVKRGPWSPE EDAKLKDYIE KHGTGGNWIA LPHKIGLQRC GKSCRLRWLN 60 YLRPNIRHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGR 120 HKQSSISSRL IPSTHSKDPN DAQEDPQQHA LSNSALERLQ LHLQLQSLQN PTSCYNNNPT 180 LWPRLHPLQE KMIQQNLLFI NQNETLIPST VVVSSQQQAV GHENVSDYSF YKPQQLDATY 240 TKLMTSSSEA VSDEYFGSIS SSTVVPKLDA GAADLNPKTF QDEYESFLSS DKMAELVSQV 300 DEFDYFKEAD SSKDQSSSFI WGSSNEFDSK SPTSTSWNTS SRLPCDHQMF QDFTFGL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 2e-91 | MYB family protein |