PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0808s0045.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 281aa    MW: 31155.2 Da    PI: 7.0367
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0808s0045.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox573.3e-18125179256
                          T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          rk+ ++t++q   Lee F+++++++ ++++ LAk+lgL  rqV vWFqNrRa+ k
  Kaladp0808s0045.1.p 125 RKKLRLTRDQSLLLEETFKEHNTLNPRQKQALAKQLGLRARQVEVWFQNRRARTK 179
                          788899***********************************************98 PP
2HD-ZIP_I/II114.37.4e-37125214191
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          +kk+rl+++q+ lLEe+F+e+++L+p++K++la++Lgl++rqv+vWFqnrRARtk+kq+E ++e++kr++++l+++ +rL+kev+eLr +
  Kaladp0808s0045.1.p 125 RKKLRLTRDQSLLLEETFKEHNTLNPRQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEAECEYMKRNCESLMDRVRRLQKEVNELR-A 213
                          69*************************************************************************************9.5 PP

          HD-ZIP_I/II  91 l 91 
                          l
  Kaladp0808s0045.1.p 214 L 214
                          5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MSAATQRNVM EMSSSDFGLG DLDLNLSLHV TTEPLTQELQ PLEPDSFSPI PVLNLAPDLS  60
PGQKVVDFTR SPTSGDQVEE GGSQNSTLST LSLKRIHPEE EPHQVPDRES PPRGGSDEED  120
GENARKKLRL TRDQSLLLEE TFKEHNTLNP RQKQALAKQL GLRARQVEVW FQNRRARTKL  180
KQTEAECEYM KRNCESLMDR VRRLQKEVNE LRALKLAPQF YMQMPPATTL TLCPSCERVG  240
IPTPAGGPVN KSRAGVERGI GPVSGGPWAS GPGQMNHRPF *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174182RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16780.16e-71HD-ZIP family protein