PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0808s0020.8.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ARR-B | ||||||||
Protein Properties | Length: 543aa MW: 60178.8 Da PI: 5.8902 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.9 | 9.7e-28 | 304 | 358 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++Wt++LH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++ Kaladp0808s0020.8.p 304 KMKVDWTSDLHKKFVQAVEQL-GVDQAIPSRILELMKVEGLTRHNVASHLQKYRMH 358 5689*****************.********************************96 PP | |||||||
2 | Myb_DNA-binding | 41.3 | 3.6e-13 | 307 | 356 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ Kaladp0808s0020.8.p 307 VDWTSDLHKKFVQAVEQLGVDqaIPSRILELMKvEGLTRHNVASHLQKYR 356 57***********************************************7 PP | |||||||
3 | Response_reg | 24.6 | 1.3e-09 | 20 | 126 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 vl+ d++ + ++ +r+ le +y +v ++ + +eal + ++ +++ ++ ++++G +k +++++ lp i+ + + +++ + Kaladp0808s0020.8.p 20 VLLLDKDANYASEIRSKLEGMDY-IVSTFCNEDEALSAVLNESevFHVAIVE--VSTVEGNGNFKFLQKAK-VLPTIMTASVQCLTTTMK 105 8999*******************.***************877778*****87..67888888999999988.999999888888****** PP HHHTTESEEEESS--HHHHHH CS Response_reg 89 alkaGakdflsKpfdpeelvk 109 ++ +Ga ++l Kp ++++l++ Kaladp0808s0020.8.p 106 CIALGAIEVLNKPLSEDKLRN 126 ******************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 543 aa Download sequence |
MVCTANDLLE WEDFPKGLRV LLLDKDANYA SEIRSKLEGM DYIVSTFCNE DEALSAVLNE 60 SEVFHVAIVE VSTVEGNGNF KFLQKAKVLP TIMTASVQCL TTTMKCIALG AIEVLNKPLS 120 EDKLRNIWQH VVHKAYNAGD SAVAESPRQV KEEELHDKLL EEMPCMSVEG CDDEHDRSSG 180 NDKYPAPSTP QLKQVRLLDD ASCHDQTNWS AEKGSAEHCE ESKSVETTCC NAAPDMPVVE 240 AGELLHESVV KEENDSADGC KSESDTSPHQ KNVPETGSLG GNARMQTKAS ESRGPCGAKT 300 NRKKMKVDWT SDLHKKFVQA VEQLGVDQAI PSRILELMKV EGLTRHNVAS HLQKYRMHRR 360 HALPNREERR ISVRPKDTMQ SSYYFQHKPI MAYPPPYHSN QTLMANQAYP MWVQPGSHTA 420 GLQAWGPPGP PYQTWPWKSY AAMQADAWGC PVMPPLQHGS YSYYPQNSAS GYYGGVDNTG 480 HTMTTNSPDD RLLADEVIDR VVKEAISKPW LPLPLGLKPP STESVLSELS KQGISNIPPP 540 SH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 1e-131 | ARR-B family protein |