PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0808s0020.10.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARR-B
Protein Properties Length: 543aa    MW: 60178.8 Da    PI: 5.8902
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0808s0020.10.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.99.7e-28304358156
               G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                           k +++Wt++LH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++
  Kaladp0808s0020.10.p 304 KMKVDWTSDLHKKFVQAVEQL-GVDQAIPSRILELMKVEGLTRHNVASHLQKYRMH 358
                           5689*****************.********************************96 PP
2Myb_DNA-binding41.33.6e-13307356248
                           SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
       Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                             WT ++++++v+av+qlG +   +++I + m  +g+t+ ++ s++qky+
  Kaladp0808s0020.10.p 307 VDWTSDLHKKFVQAVEQLGVDqaIPSRILELMKvEGLTRHNVASHLQKYR 356
                           57***********************************************7 PP
3Response_reg24.61.3e-09201261109
                           EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHH CS
          Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedal 87 
                           vl+ d++ + ++ +r+ le  +y +v ++ + +eal  + ++   +++ ++    ++++G   +k +++++  lp i+  + +  +++ 
  Kaladp0808s0020.10.p  20 VLLLDKDANYASEIRSKLEGMDY-IVSTFCNEDEALSAVLNESevFHVAIVE--VSTVEGNGNFKFLQKAK-VLPTIMTASVQCLTTTM 104
                           8999*******************.***************877778*****87..67888888999999988.999999888888***** PP

                           HHHHTTESEEEESS--HHHHHH CS
          Response_reg  88 ealkaGakdflsKpfdpeelvk 109
                           +++ +Ga ++l Kp ++++l++
  Kaladp0808s0020.10.p 105 KCIALGAIEVLNKPLSEDKLRN 126
                           *******************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MVCTANDLLE WEDFPKGLRV LLLDKDANYA SEIRSKLEGM DYIVSTFCNE DEALSAVLNE  60
SEVFHVAIVE VSTVEGNGNF KFLQKAKVLP TIMTASVQCL TTTMKCIALG AIEVLNKPLS  120
EDKLRNIWQH VVHKAYNAGD SAVAESPRQV KEEELHDKLL EEMPCMSVEG CDDEHDRSSG  180
NDKYPAPSTP QLKQVRLLDD ASCHDQTNWS AEKGSAEHCE ESKSVETTCC NAAPDMPVVE  240
AGELLHESVV KEENDSADGC KSESDTSPHQ KNVPETGSLG GNARMQTKAS ESRGPCGAKT  300
NRKKMKVDWT SDLHKKFVQA VEQLGVDQAI PSRILELMKV EGLTRHNVAS HLQKYRMHRR  360
HALPNREERR ISVRPKDTMQ SSYYFQHKPI MAYPPPYHSN QTLMANQAYP MWVQPGSHTA  420
GLQAWGPPGP PYQTWPWKSY AAMQADAWGC PVMPPLQHGS YSYYPQNSAS GYYGGVDNTG  480
HTMTTNSPDD RLLADEVIDR VVKEAISKPW LPLPLGLKPP STESVLSELS KQGISNIPPP  540
SH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.31e-131ARR-B family protein