PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0808s0020.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARR-B
Protein Properties Length: 543aa    MW: 60178.8 Da    PI: 5.8902
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0808s0020.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.99.7e-28304358156
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                          k +++Wt++LH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++
  Kaladp0808s0020.1.p 304 KMKVDWTSDLHKKFVQAVEQL-GVDQAIPSRILELMKVEGLTRHNVASHLQKYRMH 358
                          5689*****************.********************************96 PP
2Myb_DNA-binding41.33.6e-13307356248
                          SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                            WT ++++++v+av+qlG +   +++I + m  +g+t+ ++ s++qky+
  Kaladp0808s0020.1.p 307 VDWTSDLHKKFVQAVEQLGVDqaIPSRILELMKvEGLTRHNVASHLQKYR 356
                          57***********************************************7 PP
3Response_reg24.61.3e-09201261109
                          EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS
         Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 
                          vl+ d++ + ++ +r+ le  +y +v ++ + +eal  + ++   +++ ++    ++++G   +k +++++  lp i+  + +  +++ +
  Kaladp0808s0020.1.p  20 VLLLDKDANYASEIRSKLEGMDY-IVSTFCNEDEALSAVLNESevFHVAIVE--VSTVEGNGNFKFLQKAK-VLPTIMTASVQCLTTTMK 105
                          8999*******************.***************877778*****87..67888888999999988.999999888888****** PP

                          HHHTTESEEEESS--HHHHHH CS
         Response_reg  89 alkaGakdflsKpfdpeelvk 109
                          ++ +Ga ++l Kp ++++l++
  Kaladp0808s0020.1.p 106 CIALGAIEVLNKPLSEDKLRN 126
                          ******************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MVCTANDLLE WEDFPKGLRV LLLDKDANYA SEIRSKLEGM DYIVSTFCNE DEALSAVLNE  60
SEVFHVAIVE VSTVEGNGNF KFLQKAKVLP TIMTASVQCL TTTMKCIALG AIEVLNKPLS  120
EDKLRNIWQH VVHKAYNAGD SAVAESPRQV KEEELHDKLL EEMPCMSVEG CDDEHDRSSG  180
NDKYPAPSTP QLKQVRLLDD ASCHDQTNWS AEKGSAEHCE ESKSVETTCC NAAPDMPVVE  240
AGELLHESVV KEENDSADGC KSESDTSPHQ KNVPETGSLG GNARMQTKAS ESRGPCGAKT  300
NRKKMKVDWT SDLHKKFVQA VEQLGVDQAI PSRILELMKV EGLTRHNVAS HLQKYRMHRR  360
HALPNREERR ISVRPKDTMQ SSYYFQHKPI MAYPPPYHSN QTLMANQAYP MWVQPGSHTA  420
GLQAWGPPGP PYQTWPWKSY AAMQADAWGC PVMPPLQHGS YSYYPQNSAS GYYGGVDNTG  480
HTMTTNSPDD RLLADEVIDR VVKEAISKPW LPLPLGLKPP STESVLSELS KQGISNIPPP  540
SH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.31e-131ARR-B family protein