PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0808s0010.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HSF

Protein Properties

Length: 500aa MW: 55135.4 Da PI: 4.4169

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0808s0010.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.5	6.8e-36	38	130	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 Fl k+y++++d+++++++sws+ +nsfvv+++ ef +++LpkyFkhsnf+SFvRQLn+YgF+kv+ ++ weF+++ F +gkk Kaladp0808s0010.2.p 38 FLCKTYDMVDDPSTDTVVSWSSGNNSFVVWNPPEFGRDLLPKYFKHSNFSSFVRQLNTYGFRKVHPDR---------WEFANEGFLRGKK 118 9**************************************************************999.........********* PP XXXXXXXXXXXX CS HSF_DNA-bind 92 ellekikrkkse 103 +ll++ikr+k + Kaladp0808s0010.2.p 119 HLLNTIKRRKAS 130 *******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MSNGADGGIS GTCRAESTQS VPAPVPVPMP NPNAPPPFLC KTYDMVDDPS TDTVVSWSSG 60 NNSFVVWNPP EFGRDLLPKY FKHSNFSSFV RQLNTYGFRK VHPDRWEFAN EGFLRGKKHL 120 LNTIKRRKAS QAPTQSQLEQ SQVQSPAATA CVEVGKFGLE EEVEILKRDK NVLMQELVKL 180 RQQQQTTDKQ LQVTMDRLQG VEERQQQLMS FLAKAVQSPG FFSQFVLQQA QNNRLISEAN 240 KKRRLKQDDV TMDYPSSNPG SQIVKYQPFL NEVSTAFLQQ MMEVDNSSQL EFRNNDPDNL 300 FLDDASSSSN GGSSMDGVSK PPIPEVLASS AQFRSPPPSM IPPCGSAGDL VDVQHSSLGA 360 SSEVGRMIHH PPVSSDKQDS SPPSDLQSGP ALPMFTDMVP ESVAENLNDD SIQFDATTFG 420 LDTDLPFGIE SISPGHVPND MSAYEDVWKM LSEEIDSAQL DHLANESEML LVEDELDSSQ 480 NIDHLTDQME LLSSGAEKK*

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MSNGADGGIS GTCRAESTQS VPAPVPVPMP NPNAPPPFLC KTYDMVDDPS TDTVVSWSSG  60
NNSFVVWNPP EFGRDLLPKY FKHSNFSSFV RQLNTYGFRK VHPDRWEFAN EGFLRGKKHL  120
LNTIKRRKAS QAPTQSQLEQ SQVQSPAATA CVEVGKFGLE EEVEILKRDK NVLMQELVKL  180
RQQQQTTDKQ LQVTMDRLQG VEERQQQLMS FLAKAVQSPG FFSQFVLQQA QNNRLISEAN  240
KKRRLKQDDV TMDYPSSNPG SQIVKYQPFL NEVSTAFLQQ MMEVDNSSQL EFRNNDPDNL  300
FLDDASSSSN GGSSMDGVSK PPIPEVLASS AQFRSPPPSM IPPCGSAGDL VDVQHSSLGA  360
SSEVGRMIHH PPVSSDKQDS SPPSDLQSGP ALPMFTDMVP ESVAENLNDD SIQFDATTFG  420
LDTDLPFGIE SISPGHVPND MSAYEDVWKM LSEEIDSAQL DHLANESEML LVEDELDSSQ  480
NIDHLTDQME LLSSGAEKK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	240	247	NKKRRLKQ
2	241	246	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-104	HSF family protein