PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0808s0009.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 346aa MW: 38784.1 Da PI: 6.3471 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.7 | 1.3e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lvd +++ G g+W++ ++ g++R++k+c++rw +yl Kaladp0808s0009.1.p 15 KGPWTPEEDEKLVDFINKNGHGSWRSLPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.8 | 4.5e-17 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE+ l+++++ lG++ W++Ia +++ gRt++++k++w+++l Kaladp0808s0009.1.p 68 RGKFSDEEERLIIHLHSVLGNK-WSRIATHLP-GRTDNEIKNFWNTHL 113 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence |
MGRSPISFED DGLKKGPWTP EEDEKLVDFI NKNGHGSWRS LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FSDEEERLII HLHSVLGNKW SRIATHLPGR TDNEIKNFWN THLRRKLLQM 120 GIDPTTHKPR TDYNNLLMNL TQLLATPNLA NLMSNSNNTN PWDNLNALRL QADAAAQLAK 180 AQLLQNLIQA MSIPNTQNTS FGTSQDYTSL QSLLHSNSVS YDTSNALSSN QFVNPSETPL 240 THQVSDEFQG LANSWAAENC GLSTTNNSSY YQVDRDQKSS LPALVSVSTD CTSANQIEIA 300 KEDHNISSGY MFDSFSPTGS YFQSWAELLD DEAVHNSFIK DFLLQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 1e-82 | MYB family protein |