PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0746s0002.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family SBP
Protein Properties Length: 180aa    MW: 20510.6 Da    PI: 6.6209
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0746s0002.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP133.28.4e-4297173177
                          --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
                  SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                          +Cqve+C++d+s ak+yhrrhkvCe+h+ka+ ++v+gl+qrfCqqCsrfh +sefDe+krsCrrrLa+hn+rrrk++
  Kaladp0746s0002.1.p  97 ICQVENCTTDMSGAKQYHRRHKVCEFHAKAQIAVVAGLQQRFCQQCSRFHLVSEFDESKRSCRRRLAGHNQRRRKSS 173
                          5**************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MDRRRVERAR RSFKAEPVFD EDEELAEGED EADDDEDEDY DVEALLNMRP GEFVYGRRSV  60
SSAPTGHGAD GSSSSSAGWM PVPQHQLPPR TQQPLYICQV ENCTTDMSGA KQYHRRHKVC  120
EFHAKAQIAV VAGLQQRFCQ QCSRFHLVSE FDESKRSCRR RLAGHNQRRR KSSYDYPAG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1167172QRRRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.11e-41SBP family protein