PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0740s0003.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 740aa    MW: 81434 Da    PI: 9.9395
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0740s0003.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.91e-1431119598
                          -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                   B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                          l+ +++ + + l +p k ++++++  e s+ +tl+ ++gr+W++kl   k +g+ ++l++ W eF k   +++g  +vF+++g+s+f   
  Kaladp0740s0003.1.p  31 LVVASMIRDNKLKIPGKVVRKIEQ--ELSIVVTLTVPDGRKWNMKL--GKDDGGkCWLGDSWVEFMKHYSVRVGYLLVFRYKGDSTF--A 114
                          55667788889***********84..599*****************..6666656****************************9999..8 PP

                          EEEE- CS
                   B3  94 vkvfr 98 
                          v vf+
  Kaladp0740s0003.1.p 115 VNVFD 119
                          88887 PP
2B357.42.7e-18637724798
                          .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                   B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                           s+  k+g l +p kfa ++ ++  +s   tle+++g++Wev++    +  r++l++GW +F+ +n+LkegD++ F+l ++ ++ l+v++
  Kaladp0740s0003.1.p 637 ASYLQKKGYLHMPAKFAMKYLKE--TSGRATLENSEGKQWEVRI--GSSNVRITLSQGWHQFAMDNHLKEGDTCNFELLDSVNTLLKVTF 722
                          6888999**********999533..4558***************..888889*************************9887555577777 PP

                          E- CS
                   B3  97 fr 98 
                          +r
  Kaladp0740s0003.1.p 723 VR 724
                          66 PP
Sequence ? help Back to Top
Protein Sequence    Length: 740 aa     Download sequence    
MAKDDADADK DTDHTISGSS ARGKPLLFYK LVVASMIRDN KLKIPGKVVR KIEQELSIVV  60
TLTVPDGRKW NMKLGKDDGG KCWLGDSWVE FMKHYSVRVG YLLVFRYKGD STFAVNVFDL  120
SSAEIQYSVG GCEKVGEDKE PAMKNGKRSG NVRTKMTSGS EKVGQDKKFP VTKGSGSGNE  180
RVRKKPGSAK NRGKKVREGK ESVNGGTGKK LGSKDVEDDE LYLLKEDEET GNDGANKKLG  240
SSQQMPGVVC GLRSNLIEFH TECMSQIEFL NGGSEKVRLE KQSSMNNDGA RNRSGSANIR  300
QENQCTVSNG IESERDVNWK NLAMCPPGFA PKSSQQMAGM DHGVSPQSKL GESHTEFLAQ  360
TKNHRGGSSC AVEKQVKPGR GADSLGGSFP LVKDVTLGYY RANVMKSKEK KPARVRKVRN  420
PRPKNPGRDR LGLGKGGVRL NSPAKEKLTP EMPISKMARE VALLADQVSV DAKCEGRPLD  480
HMPSAADGVE VKLPVPQKLT SETQLCKQAM NVASPGLMAE DSTLHLETDQ LGTGFMTAEV  540
KSDFPPEEPL LVMITDRTRL DSTRTPVKRK KEMNISDLLD QTLPMTLAIK QEAEVNKSDL  600
ICRTTAKTAA SQKKLKSIQL SEIPHRHNPY CTVHVRASYL QKKGYLHMPA KFAMKYLKET  660
SGRATLENSE GKQWEVRIGS SNVRITLSQG WHQFAMDNHL KEGDTCNFEL LDSVNTLLKV  720
TFVRSPKEPP PPNQEVLKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-30B3 family protein