PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0674s0076.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 398aa MW: 44580.7 Da PI: 5.9805

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0674s0076.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.2	3.3e-17	137	183	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+ e d ll+++v+++G + W++Ia++++ gR +kqc++rw+++l Kaladp0674s0076.1.p 137 KGQWSLEQDMLLIQLVERYGIRKWSLIAQMLP-GRIGKQCRERWHNHL 183 799***************************.***********97 PP
2	Myb_DNA-binding	58.4	1.6e-18	191	231	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W++eEde+l++a+k+ G++ W+ Ia++++ gRt++++k++w+ Kaladp0674s0076.1.p 191 IWSEEEDEILIRAHKEIGNK-WSEIAKRLP-GRTENSIKNHWN 231 6*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MIPRPSSNWS MWDVMMNLDE QAMCFSDDNY STRPSIGSSS SGLDAFSPYD RFLRGDPAYG 60 LIPGRASPLL DSFCSYGRMA QFYAKGSGYQ ELEPVSNIMA MGNSNVAPDE VSNVAAHGDR 120 SRARRKGANK ASQDVIKGQW SLEQDMLLIQ LVERYGIRKW SLIAQMLPGR IGKQCRERWH 180 NHLRPDIKKD IWSEEEDEIL IRAHKEIGNK WSEIAKRLPG RTENSIKNHW NATKRKQNAK 240 RKTRSKNPKS SSLLLQYIRG LNCSSSDGST TKPCDPRKKG ARSRASENEG KSPEHQGRIQ 300 VVDCGLEFSS EDRLVPDYGE FGDVPDLDFM DDDKLFGEDG SIDSFLDSIE FLPSFDDGGN 360 GDEKHDIGAA DRGAEERDGG GVRRDMDLVE MISQQVK*

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MIPRPSSNWS MWDVMMNLDE QAMCFSDDNY STRPSIGSSS SGLDAFSPYD RFLRGDPAYG  60
LIPGRASPLL DSFCSYGRMA QFYAKGSGYQ ELEPVSNIMA MGNSNVAPDE VSNVAAHGDR  120
SRARRKGANK ASQDVIKGQW SLEQDMLLIQ LVERYGIRKW SLIAQMLPGR IGKQCRERWH  180
NHLRPDIKKD IWSEEEDEIL IRAHKEIGNK WSEIAKRLPG RTENSIKNHW NATKRKQNAK  240
RKTRSKNPKS SSLLLQYIRG LNCSSSDGST TKPCDPRKKG ARSRASENEG KSPEHQGRIQ  300
VVDCGLEFSS EDRLVPDYGE FGDVPDLDFM DDDKLFGEDG SIDSFLDSIE FLPSFDDGGN  360
GDEKHDIGAA DRGAEERDGG GVRRDMDLVE MISQQVK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	2e-73	MYB family protein