PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0674s0067.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 333aa    MW: 36618.7 Da    PI: 7.8828
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0674s0067.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.91.5e-152067148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg W+++Ede+l  ++++ G g+W+++++  g+ R++k+c++rw +yl
  Kaladp0674s0067.1.p 20 RGLWSPDEDEKLFSYITRNGVGCWSSVPKLAGLQRCGKSCRLRWINYL 67
                         788*******************************************97 PP
2Myb_DNA-binding52.41.2e-1673116146
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          rg++++ E+el+v ++++lG++ W+ Ia+ m+ gRt++++k++w++
  Kaladp0674s0067.1.p  73 RGSFSQKEEELIVSLHELLGNR-WAQIAAQMP-GRTDNEIKNFWNS 116
                          899*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MGRNLCSTST TTAARQRVRR GLWSPDEDEK LFSYITRNGV GCWSSVPKLA GLQRCGKSCR  60
LRWINYLRPD LKRGSFSQKE EELIVSLHEL LGNRWAQIAA QMPGRTDNEI KNFWNSCLKK  120
KLISQGIDPS THKPAASEIQ SKKRAQETSG SVKNGGEVST GDEAKFPVDE SRYYESKPLF  180
GASSLPATTQ FEIFGVGYGS NVINPFPHVT RPGFDSRPPS QFSAYAAGLL NSERGGVRET  240
HFSDMSGSRS TSNISHSYGV TQSIGQAAAA SFSWAEGGKK LETLFQLPDF IKSQDQDPSP  300
WAQNSSDDFN SYPALSLSED LSGLDFEVFQ ET*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.12e-73MYB family protein