PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0671s0007.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 271aa    MW: 30185.6 Da    PI: 6.93
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0671s0007.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.71.1e-171865148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g W+ eEd+ l+d+v+ +G+g+W++++r+ g++R++k+c++rw +yl
  Kaladp0671s0007.1.p 18 KGLWSVEEDQMLLDYVNTHGKGHWNRVSRKTGLKRSGKSCRLRWMNYL 65
                         678*******************************************97 PP
2Myb_DNA-binding58.81.3e-1871116148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          r r+T++Ed+l+++++k+lG++ W++Ia +++ gRt++q+k++w+++l
  Kaladp0671s0007.1.p  71 RERFTEDEDDLIIRLHKLLGNR-WALIAGRVP-GRTDNQVKNYWNTHL 116
                          78********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MKDSKPQMNG SSEDRVRKGL WSVEEDQMLL DYVNTHGKGH WNRVSRKTGL KRSGKSCRLR  60
WMNYLSPSVK RERFTEDEDD LIIRLHKLLG NRWALIAGRV PGRTDNQVKN YWNTHLSKKL  120
DTPNTQPAHS KPVIMHNCSE LRSCCSGNNL STAPADDQMI SSDFSSNTTC GTKTRSVTVP  180
IETANTEEED ETNIMKESVS GDVANRQIGA LQTSKADELR QIETVAADAG ADDDGDHGSC  240
CFMQYLDDYT LHFVLNNNKR NNAASATAGM *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.11e-63MYB family protein