PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0631s0002.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 274aa MW: 30287.3 Da PI: 7.252 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 31.2 | 5.8e-10 | 22 | 90 | 2 | 70 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 Wt l+L++ + +e + ++ + ++W+ +s+++++ g++r+ qC+ +w++l +y ik ++++ Kaladp0631s0002.1.p 22 WTLTDSLTLVNEISAVEADCLDALSYYQKWKIISDNCAALGVNRTLDQCRRRWDSLFADYNSIKLWDED 90 9999999999999999999999999**************************************998875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MPPKKTEESA SRRTRSQVAP DWTLTDSLTL VNEISAVEAD CLDALSYYQK WKIISDNCAA 60 LGVNRTLDQC RRRWDSLFAD YNSIKLWDED GGGYWGLGGE RRRGIGLPEE FDRDLFNAVD 120 VVVKGQVERA SSRHDAVLGD ADADPLGVIS PPVFKKQNHQ LTPLKRQIEV KKEKQIVGDK 180 KTGPMEVMAT QKGEKATSSS VEVMASQLRE KAEMIQAILE GKIAENKDYT LSDLKQGAAS 240 RANLARRQGD KLIDCFGAIG STLDQLCKVT LTR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31270.1 | 4e-45 | Trihelix family protein |