PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0587s0005.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C2H2 | ||||||||
Protein Properties | Length: 210aa MW: 22947.1 Da PI: 10.1938 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.5 | 5.3e-06 | 181 | 203 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 C+ Cg++F+ +nL++H+ + H Kaladp0587s0005.1.p 181 ACSQCGEVFPKLENLEHHQAVrH 203 6******************9888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MKLAASSSSH SLTSILLSSY CYLLALFFFM ALFTFQQPDP KPNTKKKKKQ KEKEKEKEKQ 60 KQQQPSSSSW DQIKNLLHCK QTEVIIPGKA PVEKQSGSSK NNNGSSNYSC KSICRFGDVV 120 HGTTRVVHRA DNSPEGSSVG RESGRKKIHE SSGRVVGNGS GRSVGGGSCG PYPIPRRTVC 180 ACSQCGEVFP KLENLEHHQA VRHAGMYAF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75710.1 | 1e-11 | C2H2 family protein |