PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0550s0040.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C2H2 | ||||||||
Protein Properties | Length: 252aa MW: 27066.2 Da PI: 6.6887 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.9 | 0.00016 | 151 | 173 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg Fs+ L H+r+H Kaladp0550s0040.1.p 151 HQCSVCGSEFSSGQALGGHMRRH 173 79********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MELPEHEATA VAAPVHQEPL TLSIDRGNRA NRPSRVSSDE EERRICDSVV TEEEQDLANC 60 LILLARAELV RGGKRKLADL GGCHECKACN KTFPSFQGLY GHRAGHGKPR SEINDCDAEK 120 QLSTSLQLST TNSRNGNVSS VKASALSNRV HQCSVCGSEF SSGQALGGHM RRHRAVPAPV 180 RSPCTGVSSP ATSMGEVKTL SVFSLDLNLP APEESEIDHQ RGLEDEQNAA CFQQNTPVFS 240 AHAHALLGCH H* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28200.1 | 3e-33 | C2H2 family protein |