PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0515s0212.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 800aa MW: 92762.2 Da PI: 8.8273

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0515s0212.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.1	3.9e-25	96	182	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA + GF +rk+ s +s+rnge++++++vC+keg+++ ++ +++++r rtgC+ak+++ ++ +gkw+v+k++ eHnH+l+ Kaladp0515s0212.1.p 96 AYNHYAARRGFGIRKHFSARSRRNGEVIRKEYVCNKEGFKNVVPQT-IDHKKRRRDARTGCQAKIEIGQK-SGKWVVDKFSDEHNHPLT 182 5***************************************9999.89999999*********99.**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 800 aa Download sequence
MDQPNNNPQP TETETRPEEG ADGALFYSGF PISQQSRLEN FMDYGSVLSN NLMEDAPIQM 60 DSRNTDNTIV RDASCEKVVD SLLGKYFDTM EEAYDAYNHY AARRGFGIRK HFSARSRRNG 120 EVIRKEYVCN KEGFKNVVPQ TIDHKKRRRD ARTGCQAKIE IGQKSGKWVV DKFSDEHNHP 180 LTSPNKVLKH RSHCKYHKSI EGKKLIYDLH AAGLTPSQIM KAVNTLTGTL HEDITAKKCS 240 EVLRTHKRNH VGKECLGIIK HFQEKSGRGD DFYFNVQIDN DGCLRNVFWA DERSRTSYLK 300 FGDVMVFDVT YRTNKFKMPF SPFVGVNHHR QSVLFGGALL DDETEETFVW LFEQFLKCMN 360 FKPPQAIITD QDKAIRNAVK RVFPDARHRF CAWHIKKHVL EHIQPFRTRY KDFADTFYIW 420 IKSKSPKEFE EGWKILNEKY KIGEKGWLPT MYKDRRYWVK CYLKNTFFAG MTTSGRSESI 480 HSFFDGYVNA TTPLNEFVVQ YDKAVAARRK SEEDEDFSTL NSQPALITEH GIEKDAGRYY 540 TRSIFQLFQR EWHASLSLEH TKRQISDMLV SYFVGSDREQ QTVEYDSEQQ IVRCSCAKFE 600 TDGILCKHAL YILKKKKIKN LPKNYLLYRW TIDARYHMAH KLVESEDAKA SDHVVSAEEK 660 WVARTMFHQI IRDADYSPSI FKEFIQTSKI FMVRLRGERE VTENALIVES SIQSQSTCEV 720 SHVELEPTQV TILDPACDKV NKGRPKSASR IPSAIEKIKN YKCSECKRNG HNKTTCPEKK 780 VGHVHHDDQI SQLDSVINL*

Sequence ? help Back to Top

Protein Sequence Length: 800 aa Download sequence

MDQPNNNPQP TETETRPEEG ADGALFYSGF PISQQSRLEN FMDYGSVLSN NLMEDAPIQM  60
DSRNTDNTIV RDASCEKVVD SLLGKYFDTM EEAYDAYNHY AARRGFGIRK HFSARSRRNG  120
EVIRKEYVCN KEGFKNVVPQ TIDHKKRRRD ARTGCQAKIE IGQKSGKWVV DKFSDEHNHP  180
LTSPNKVLKH RSHCKYHKSI EGKKLIYDLH AAGLTPSQIM KAVNTLTGTL HEDITAKKCS  240
EVLRTHKRNH VGKECLGIIK HFQEKSGRGD DFYFNVQIDN DGCLRNVFWA DERSRTSYLK  300
FGDVMVFDVT YRTNKFKMPF SPFVGVNHHR QSVLFGGALL DDETEETFVW LFEQFLKCMN  360
FKPPQAIITD QDKAIRNAVK RVFPDARHRF CAWHIKKHVL EHIQPFRTRY KDFADTFYIW  420
IKSKSPKEFE EGWKILNEKY KIGEKGWLPT MYKDRRYWVK CYLKNTFFAG MTTSGRSESI  480
HSFFDGYVNA TTPLNEFVVQ YDKAVAARRK SEEDEDFSTL NSQPALITEH GIEKDAGRYY  540
TRSIFQLFQR EWHASLSLEH TKRQISDMLV SYFVGSDREQ QTVEYDSEQQ IVRCSCAKFE  600
TDGILCKHAL YILKKKKIKN LPKNYLLYRW TIDARYHMAH KLVESEDAKA SDHVVSAEEK  660
WVARTMFHQI IRDADYSPSI FKEFIQTSKI FMVRLRGERE VTENALIVES SIQSQSTCEV  720
SHVELEPTQV TILDPACDKV NKGRPKSASR IPSAIEKIKN YKCSECKRNG HNKTTCPEKK  780
VGHVHHDDQI SQLDSVINL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	613	623	LKKKKIKNLPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-124	FAR1 family protein