PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0515s0205.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 277aa    MW: 30872.6 Da    PI: 7.2367
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0515s0205.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.42.2e-151461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT+ Ed++l  +++ +G g W+ I++  g+ R++k+c++rw++yl
  Kaladp0515s0205.1.p 14 KGAWTASEDKILTGYITAHGEGKWRDIPKLSGLQRCGKSCRLRWLNYL 61
                         79********************************************97 PP
2Myb_DNA-binding50.16.2e-1667111147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          rg+ +++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++
  Kaladp0515s0205.1.p  67 RGNISADEEDLIIRLHRLLGNR-WSLIAGRLP-GRTDNEIKNYWNTH 111
                          7899******************.*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MGRKPCCPKT GVKKGAWTAS EDKILTGYIT AHGEGKWRDI PKLSGLQRCG KSCRLRWLNY  60
LRPDIKRGNI SADEEDLIIR LHRLLGNRWS LIAGRLPGRT DNEIKNYWNT HHAKKLAQPV  120
RNNRQNVSLH KNSSLHKPAE AAFLGPPNRT SDMNNVAKAK HVESCFVPVP AMPWRNGSVQ  180
GDQDCLDVGW DFELGDISLC GDEFDWIFSD SEEVHDFHGT EAPIRSESPE NLGDYLENRA  240
AGQKDYDGVK PSSSAAAADE RTSVEDWAGY FLLTSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.13e-61MYB family protein