PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0515s0017.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 886aa MW: 98210.2 Da PI: 6.9275 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 25.8 | 2.7e-08 | 164 | 215 | 22 | 72 |
trihelix 22 rrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.t 72 +++k+++ + +ev++++ ++g+er +k kw+n+ ++++k+ ++e+++ + Kaladp0515s0017.1.p 164 GNNKSRAEKDREVAEFLNRHGVERDAKAAGTKWDNMLGDFRKVYQWERGGgR 215 45678889999************************************98733 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 886 aa Download sequence |
MGAVTGDPLK YPPTTSFEHQ LQLESPNVNP KRPRYGNSSG SQWKQLLPSP TSAQTQPLMQ 60 QALLISASTP DASSPSSSAN PQLQVLQTQQ PSAAAASSTN TAASSPSLDA AGRDEQQHQV 120 HGHGQLRKGK YVSPVWKPYE MLMLAKGWHI QYMSAARPGS DGRGNNKSRA EKDREVAEFL 180 NRHGVERDAK AAGTKWDNML GDFRKVYQWE RGGGRVEAGV TKSYFRLSPY ERKNQHGLPT 240 SFDEEVFEEM ALFMGPRRSG SYSSLLQHTT VGSGKEDDDG AAAAGPSLPV PPVPLSSSVP 300 NTLRRIGKMK MMWEECVNLW AEEGETQSGR VNICSPSTTA SSLSSFLNAD ELVFFDDSMV 360 ATTLEAFENG PLSGFSTDRF APGQQVRVFG RRRAAPRFHA SWLMGCQDPS KYYLDSLKTS 420 PATLPTLVEL SRYLQEPPPK ELRFPLRPEV YRDLPQGKDL FFTTSSEPLD CRMITYDILG 480 QVLRSKNLSE CTLTASGGRD SYIGLWDDCI NVVVCKFCSL GIVFVRKPHH ALPCSTECLW 540 PNVTGFVRGL CLWRGEERGE VRGEGGAMTH PSKSLVQKFL WGYVDLPYVL GYYAVGCTVT 600 FCALSRVSQD EQKQVLCTDL LTIDLSSQAD RLRALIPCWR IATLLPLLAD KCLNYATATS 660 VEAGLPLFSD FERIELGMGD AIERTPNYET RYFSSERRWA SVKEIYGFLE TRIPHSEYMA 720 ESSETQLSLL FKPRGCKVKP RSVDQLIEAL KNITKSLVAL HDLSFMHRDI SWDSVLRRVD 780 SESDEEWFLS QFDAAAGAPQ MSAFCSGVGE GGHAPEMKRG LHGVKVDVWG IGWLIKTSGL 840 LLPMQLTDLQ SRCLEHNQEM RPTAADCYHH LLQLSAAAAA RDYSR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 3e-06 | Trihelix family protein |