PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0496s0018.5.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 715aa MW: 77548.5 Da PI: 6.7263

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0496s0018.5.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.1	2.7e-15	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ Kaladp0496s0018.5.p 24 RERWTEEEHGRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 715 aa Download sequence
MDLCSSGEEL VIKSRKPYTI SKQRERWTEE EHGRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFL KLEKDASGKG VLISEVHHID IPPPRPKKKP NNPYPRKISV VVPTLTVEAK 120 DGKKSIPISS CPVKQVQEPH NGVLQEKPGG KETLDTSCTS VSLSHRVEKM HEDEPNQHPD 180 QDGTELTTMR KDSSENRNLE MLQASPDSVV QCVNLKWDKS QTCSTQASTE ATQSYPGKVP 240 VNAVGSSPEP FRLSSHPFFY QFLPDQLGGT AFSPNDFTSS DASATREPKC PSEMIGPSNS 300 PITPFFLNHE DAYRAYLQFS SAFSNLVVST LQQNPAAYAA AGVAAASFWP NINAEAPAGY 360 CGGFPMKVMD TGGASPSITA ITAATVAAAT AWWASNGLIP FCASQQSLTH SQSCFTTNNV 420 VPHAAARTRT VTDEKSHQDT TVSQDQQAEV VNSPTFPGRN SAFKPLTTVL EKSEESQVMV 480 MDKQVPPTAV ISKNKSAAMD VEIQGSNTDL KDGKKLDRSS SGSNTTSSTE LEETDVLEKH 540 ESGNEESNAP DDAHSIGDSS NRRGRNVPNA NESWKEVSEE GRVAFQALFS RQVLPQKFSS 600 SAGLVTLETH ANTDQESKLK LGGVASPIDL NSDILVSCSA DGVVKTNGKV RAECEGQEIL 660 HSIGVGKLRT HKTGFKPYKR SSVEPKDISV PNCCSQGKDK RLKRMCLEGG EASA*

Sequence ? help Back to Top

Protein Sequence Length: 715 aa Download sequence

MDLCSSGEEL VIKSRKPYTI SKQRERWTEE EHGRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFL KLEKDASGKG VLISEVHHID IPPPRPKKKP NNPYPRKISV VVPTLTVEAK  120
DGKKSIPISS CPVKQVQEPH NGVLQEKPGG KETLDTSCTS VSLSHRVEKM HEDEPNQHPD  180
QDGTELTTMR KDSSENRNLE MLQASPDSVV QCVNLKWDKS QTCSTQASTE ATQSYPGKVP  240
VNAVGSSPEP FRLSSHPFFY QFLPDQLGGT AFSPNDFTSS DASATREPKC PSEMIGPSNS  300
PITPFFLNHE DAYRAYLQFS SAFSNLVVST LQQNPAAYAA AGVAAASFWP NINAEAPAGY  360
CGGFPMKVMD TGGASPSITA ITAATVAAAT AWWASNGLIP FCASQQSLTH SQSCFTTNNV  420
VPHAAARTRT VTDEKSHQDT TVSQDQQAEV VNSPTFPGRN SAFKPLTTVL EKSEESQVMV  480
MDKQVPPTAV ISKNKSAAMD VEIQGSNTDL KDGKKLDRSS SGSNTTSSTE LEETDVLEKH  540
ESGNEESNAP DDAHSIGDSS NRRGRNVPNA NESWKEVSEE GRVAFQALFS RQVLPQKFSS  600
SAGLVTLETH ANTDQESKLK LGGVASPIDL NSDILVSCSA DGVVKTNGKV RAECEGQEIL  660
HSIGVGKLRT HKTGFKPYKR SSVEPKDISV PNCCSQGKDK RLKRMCLEGG EASA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	1e-39	MYB_related family protein