PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0476s0019.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 517aa MW: 54784.7 Da PI: 5.8923 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.4 | 6.3e-09 | 339 | 387 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq Kaladp0476s0019.4.p 339 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 387 58*************************9....556*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 517 aa Download sequence |
MTDDNKFETE KRPEDSMNYH PSHMSSDWAY DIIPGSSMGL DSSAACEGGS VIGSSSCPSD 60 PMMISGPDSW NRSVVGSSVG GFCGIDVGNS AGSFSMLEQL RGSGELMRPM FDGGWNPKGG 120 LFLPNGPGLP PRSLSQFPSD SGFIERAARF SCFGSGSFSD MVSPFAAPES VSPLARGPSI 180 VDGSRPLAFE NEVIMAGAST SGGRNGSLSR NQSVARSLDE SRQGRGASSN ESDEANFGGG 240 DGREGPSMLE AAGGETCPAR GHSANKRKRA GQSARANKSN GASPKSVDGA KPGGERSEQK 300 PSPGSNTKAP EKPEQKSQGT DPPKEEYIHV RARRGQATNS HSLAERVRRE KISERMKFLQ 360 DLVPGCSKVT GKAVMLDEII NYVQSLQRQV EFLSMKLSTV NPRLDFDIES LLTKDMFQPR 420 AGSSSTSGFP SDTCMGYQHQ ITSLSAQFQA GVPISGSSMG AHLAVMGFKE PNSQLANMWD 480 DELHNVVHMG FGNSSEPSKS QELNDSLQSG PMKPEP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68920.3 | 2e-90 | bHLH family protein |