PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0476s0019.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 517aa MW: 54784.7 Da PI: 5.8923

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0476s0019.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.4	6.3e-09	339	387	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq Kaladp0476s0019.3.p 339 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 387 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MTDDNKFETE KRPEDSMNYH PSHMSSDWAY DIIPGSSMGL DSSAACEGGS VIGSSSCPSD 60 PMMISGPDSW NRSVVGSSVG GFCGIDVGNS AGSFSMLEQL RGSGELMRPM FDGGWNPKGG 120 LFLPNGPGLP PRSLSQFPSD SGFIERAARF SCFGSGSFSD MVSPFAAPES VSPLARGPSI 180 VDGSRPLAFE NEVIMAGAST SGGRNGSLSR NQSVARSLDE SRQGRGASSN ESDEANFGGG 240 DGREGPSMLE AAGGETCPAR GHSANKRKRA GQSARANKSN GASPKSVDGA KPGGERSEQK 300 PSPGSNTKAP EKPEQKSQGT DPPKEEYIHV RARRGQATNS HSLAERVRRE KISERMKFLQ 360 DLVPGCSKVT GKAVMLDEII NYVQSLQRQV EFLSMKLSTV NPRLDFDIES LLTKDMFQPR 420 AGSSSTSGFP SDTCMGYQHQ ITSLSAQFQA GVPISGSSMG AHLAVMGFKE PNSQLANMWD 480 DELHNVVHMG FGNSSEPSKS QELNDSLQSG PMKPEP*

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MTDDNKFETE KRPEDSMNYH PSHMSSDWAY DIIPGSSMGL DSSAACEGGS VIGSSSCPSD  60
PMMISGPDSW NRSVVGSSVG GFCGIDVGNS AGSFSMLEQL RGSGELMRPM FDGGWNPKGG  120
LFLPNGPGLP PRSLSQFPSD SGFIERAARF SCFGSGSFSD MVSPFAAPES VSPLARGPSI  180
VDGSRPLAFE NEVIMAGAST SGGRNGSLSR NQSVARSLDE SRQGRGASSN ESDEANFGGG  240
DGREGPSMLE AAGGETCPAR GHSANKRKRA GQSARANKSN GASPKSVDGA KPGGERSEQK  300
PSPGSNTKAP EKPEQKSQGT DPPKEEYIHV RARRGQATNS HSLAERVRRE KISERMKFLQ  360
DLVPGCSKVT GKAVMLDEII NYVQSLQRQV EFLSMKLSTV NPRLDFDIES LLTKDMFQPR  420
AGSSSTSGFP SDTCMGYQHQ ITSLSAQFQA GVPISGSSMG AHLAVMGFKE PNSQLANMWD  480
DELHNVVHMG FGNSSEPSKS QELNDSLQSG PMKPEP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	2e-90	bHLH family protein