PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0427s0038.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HSF
Protein Properties Length: 361aa    MW: 40823.3 Da    PI: 4.869
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0427s0038.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1171.2e-36421332102
                          HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
         HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 
                          Fl+k+y+i+++++++++isws+ +nsfvv+d++ fa ++Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++         weF++++F +g++
  Kaladp0427s0038.1.p  42 FLTKTYDIVDNQSTNHIISWSSGNNSFVVWDPQAFAMTLLPRYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEEFLRGQR 122
                          9****************************************************************999.........************* PP

                          XXXXXXXXXXX CS
         HSF_DNA-bind  92 ellekikrkks 102
                          +ll++i+r+++
  Kaladp0427s0038.1.p 123 HLLSNIRRRRT 133
                          ********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MDRNYGGEGA SSDLGGGGSS SSKSAQIPVP MEGLHQAGPP PFLTKTYDIV DNQSTNHIIS  60
WSSGNNSFVV WDPQAFAMTL LPRYFKHNNF SSFVRQLNTY GFRKVDPDRW EFANEEFLRG  120
QRHLLSNIRR RRTSGSSPQT PFPLSQQSAD ACVEVGLFGS LDKEIDRLKR DKQMLMLEMA  180
KIRQQQKSNK TYLASMEQRL RGTEMKQQQL MRFLAKAIRN PAFMQQLIQQ RELRKNNLLV  240
DAANKRRHID QGPSDIGETV TKTEPFEDQY INFETPQQQL NMMLGGTDLQ SAGFSEPEGD  300
QTPHMAVGDE QERSLDELFW DQFLNDNNTG EDLSFMGGDG EDDTEENLFI SDHFGDQGSS  360
*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119132RGQRHLLSNIRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-101HSF family protein