PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0418s0009.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 155aa MW: 17676.9 Da PI: 10.7362 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.6 | 4.5e-16 | 10 | 58 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l +++ ++Gg+ +W++++ ++g+ R +k+c++rw +yl Kaladp0418s0009.1.p 10 RGLWSPEEDEKLRNYILRHGGHgSWSSVPVEIGLQRNGKSCRLRWINYL 58 788******************9*************************97 PP | |||||||
2 | Myb_DNA-binding | 50 | 6.9e-16 | 64 | 109 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++t E+e + +++ lG++ W+ Ia++++ gRt++++k++w+++l Kaladp0418s0009.1.p 64 RGMFSTAEEETIMALHRDLGNK-WSQIAQKLP-GRTDNEIKNYWHTHL 109 788*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MGSEKPKHRR GLWSPEEDEK LRNYILRHGG HGSWSSVPVE IGLQRNGKSC RLRWINYLRP 60 GLKRGMFSTA EEETIMALHR DLGNKWSQIA QKLPGRTDNE IKNYWHTHLK KRIGGTFSSA 120 PKTSQELINS WSTNVSSTFS SPNYSSKPLT QVPSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25560.1 | 2e-57 | MYB family protein |