PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0418s0008.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 310aa MW: 34846.9 Da PI: 6.6465 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.2 | 2.4e-15 | 16 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l +++ ++Gg+ +W++++ ++g+ R +k+c++rw +yl Kaladp0418s0008.1.p 16 KGLWSPEEDEKLRNYILRHGGHgSWSSVPIEIGLQRNGKSCRLRWINYL 64 678******************9*************************97 PP | |||||||
2 | Myb_DNA-binding | 51.3 | 2.7e-16 | 70 | 115 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++t+E+e ++ +++ lG++ W+ Ia++++ gRt++++k++w+++l Kaladp0418s0008.1.p 70 RGMFSTDEEEMILALHRDLGNK-WSQIAQKLP-GRTDNEIKNYWHTHL 115 788*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MALDKPKKVP KPKHRKGLWS PEEDEKLRNY ILRHGGHGSW SSVPIEIGLQ RNGKSCRLRW 60 INYLRPGLKR GMFSTDEEEM ILALHRDLGN KWSQIAQKLP GRTDNEIKNY WHTHLKKRSA 120 RAFSLAPKTS QELINSWSTS VSSSLSSPTS YSSKPLTQVP ISFEFCHTFR ASSACTEPAV 180 DDHDHHTMLS SGLNGFPNDG IQSSLPKLFF EEWLSLDRTN TSNQQLNPSD DQLAAASILM 240 GDTFMDNEFL QHERSSALDF ESGQGGNWAN DIVSYPDLCL DGSLADGCFN FGISNDHDEF 300 SGFKYVMYP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25560.1 | 3e-56 | MYB family protein |