PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0403s0009.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 334aa    MW: 37265.7 Da    PI: 6.3688
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0403s0009.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding491.4e-153077148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g W++eEde+l+ +  + G g+W+ +ar  g+ R++k+c++rw +yl
  Kaladp0403s0009.1.p 30 KGLWSPEEDEKLISYMLRNGQGCWSDVARNAGLQRCGKSCRLRWINYL 77
                         678*******************************************97 PP
2Myb_DNA-binding537.8e-1783126146
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          rg++++ E+el+v+++ +lG++ W+ Ia++++ gRt++++k++w++
  Kaladp0403s0009.1.p  83 RGAFSPHEEELIVQLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 126
                          89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MRKPAVDYSS FTPPSSSSSS MKNGNGKLRK GLWSPEEDEK LISYMLRNGQ GCWSDVARNA  60
GLQRCGKSCR LRWINYLRPD LKRGAFSPHE EELIVQLHSL LGNRWSQIAA RLPGRTDNEI  120
KNFWNSTIKK RPKNNALLSN TILPSPSDDQ FSLGLMYMQQ NHQHHLIHQS SNNNIFMAAA  180
DAATCSYMDH SSSSGSSSSP SMVLNHMNTN PTSLLMSCDM LLDDPSLVDI YNFGDGLVEL  240
YVPPLETIIT SSNTSMSFND NNSILEAGVN KVGHHQQRHI MEAADRYSCG SDVQEKLSCD  300
SFGETNIRLG EWDLEELMRS SETAYSVPHI DLQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.16e-67MYB family protein